Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
DEFA3P59666 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.91□□□□□ -0.34
DEFA3P59666 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
DEFA3P59666 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.91□□□□□ -0.34
DEFA3P59666 NBN-201ENST00000265433 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DEFA3P59666 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DEFA3P59666 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC12.91□□□□□ -0.34
DEFA3P59666 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
DEFA3P59666 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DEFA3P59666 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
DEFA3P59666 AK4P3-201ENST00000418260 669 ntBASIC12.91□□□□□ -0.34
DEFA3P59666 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.91□□□□□ -0.34
DEFA3P59666 IGHV3-65-201ENST00000523210 341 ntBASIC12.91□□□□□ -0.34
DEFA3P59666 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
DEFA3P59666 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.91□□□□□ -0.34
DEFA3P59666 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.91□□□□□ -0.34
DEFA3P59666 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC12.91□□□□□ -0.34
DEFA3P59666 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.91□□□□□ -0.34
DEFA3P59666 AC015910.1-201ENST00000579400 975 ntBASIC12.91□□□□□ -0.34
DEFA3P59666 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.91□□□□□ -0.34
DEFA3P59666 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.91□□□□□ -0.34
DEFA3P59666 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC12.91□□□□□ -0.34
DEFA3P59666 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.91□□□□□ -0.34
DEFA3P59666 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
DEFA3P59666 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
DEFA3P59666 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DEFA3P59666 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DEFA3P59666 AC007614.5-201ENST00000623424 8892 ntBASIC12.91□□□□□ -0.34
DEFA3P59666 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DEFA3P59666 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.91□□□□□ -0.34
DEFA3P59666 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DEFA3P59666 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
DEFA3P59666 NAV2-204ENST00000396087 7882 ntTSL 5 BASIC12.91□□□□□ -0.34
DEFA3P59666 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DEFA3P59666 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
DEFA3P59666 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
DEFA3P59666 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
DEFA3P59666 PCDHA6-201ENST00000378126 3267 ntBASIC12.91□□□□□ -0.34
DEFA3P59666 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
DEFA3P59666 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
DEFA3P59666 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DEFA3P59666 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.9□□□□□ -0.34
DEFA3P59666 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
DEFA3P59666 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA3P59666 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
DEFA3P59666 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA3P59666 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
DEFA3P59666 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA3P59666 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC12.9□□□□□ -0.34
DEFA3P59666 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA3P59666 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA3P59666 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
DEFA3P59666 AC060814.4-201ENST00000594169 2163 ntBASIC12.9□□□□□ -0.34
DEFA3P59666 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.9□□□□□ -0.34
DEFA3P59666 AGGF1P10-201ENST00000635005 2191 ntBASIC12.9□□□□□ -0.34
DEFA3P59666 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA3P59666 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA3P59666 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA3P59666 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA3P59666 CSPG4P13-202ENST00000567704 4801 ntBASIC12.9□□□□□ -0.34
DEFA3P59666 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
DEFA3P59666 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA3P59666 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA3P59666 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.9□□□□□ -0.34
DEFA3P59666 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
DEFA3P59666 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
DEFA3P59666 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA3P59666 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
DEFA3P59666 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC12.9□□□□□ -0.34
DEFA3P59666 AC003958.1-201ENST00000435883 421 ntBASIC12.9□□□□□ -0.34
DEFA3P59666 AC136632.2-201ENST00000512891 861 ntBASIC12.9□□□□□ -0.34
DEFA3P59666 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
DEFA3P59666 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.9□□□□□ -0.34
DEFA3P59666 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.9□□□□□ -0.34
DEFA3P59666 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC12.9□□□□□ -0.34
DEFA3P59666 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA3P59666 AC099336.1-202ENST00000602961 463 ntBASIC12.9□□□□□ -0.34
DEFA3P59666 AC026979.3-201ENST00000607315 403 ntBASIC12.9□□□□□ -0.34
DEFA3P59666 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC12.9□□□□□ -0.34
DEFA3P59666 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
DEFA3P59666 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA3P59666 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA3P59666 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA3P59666 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA3P59666 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
DEFA3P59666 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
DEFA3P59666 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
DEFA3P59666 FAM90A11P-201ENST00000518378 2218 ntBASIC12.9□□□□□ -0.34
DEFA3P59666 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
DEFA3P59666 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA3P59666 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
DEFA3P59666 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
DEFA3P59666 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
DEFA3P59666 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA3P59666 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA3P59666 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA3P59666 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA3P59666 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA3P59666 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DEFA3P59666 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms