Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKN2DP55273 AC006001.1-201ENST00000325130 474 ntBASIC14.51□□□□□ -0.09
CDKN2DP55273 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CDKN2DP55273 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKN2DP55273 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.51□□□□□ -0.09
CDKN2DP55273 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDKN2DP55273 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDKN2DP55273 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.51□□□□□ -0.09
CDKN2DP55273 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.51□□□□□ -0.09
CDKN2DP55273 AL358472.5-202ENST00000641448 1267 ntBASIC14.51□□□□□ -0.09
CDKN2DP55273 AL359881.3-201ENST00000602640 1721 ntBASIC14.51□□□□□ -0.09
CDKN2DP55273 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
CDKN2DP55273 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
CDKN2DP55273 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKN2DP55273 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKN2DP55273 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
CDKN2DP55273 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKN2DP55273 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKN2DP55273 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKN2DP55273 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDKN2DP55273 AC097376.2-205ENST00000610159 5334 ntBASIC14.51□□□□□ -0.09
CDKN2DP55273 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.51□□□□□ -0.09
CDKN2DP55273 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.51□□□□□ -0.09
CDKN2DP55273 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKN2DP55273 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDKN2DP55273 KRT8P4-201ENST00000509735 1454 ntBASIC14.5□□□□□ -0.09
CDKN2DP55273 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.5□□□□□ -0.09
CDKN2DP55273 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKN2DP55273 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.5□□□□□ -0.09
CDKN2DP55273 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKN2DP55273 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKN2DP55273 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDKN2DP55273 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKN2DP55273 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CDKN2DP55273 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.5□□□□□ -0.09
CDKN2DP55273 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKN2DP55273 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
CDKN2DP55273 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKN2DP55273 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKN2DP55273 MIR1202-201ENST00000408529 83 ntBASIC14.5□□□□□ -0.09
CDKN2DP55273 ARSEP1-201ENST00000420443 635 ntBASIC14.5□□□□□ -0.09
CDKN2DP55273 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.5□□□□□ -0.09
CDKN2DP55273 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.5□□□□□ -0.09
CDKN2DP55273 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.5□□□□□ -0.09
CDKN2DP55273 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.5□□□□□ -0.09
CDKN2DP55273 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDKN2DP55273 CICP12-201ENST00000455801 843 ntBASIC14.5□□□□□ -0.09
CDKN2DP55273 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDKN2DP55273 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
CDKN2DP55273 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDKN2DP55273 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.5□□□□□ -0.09
CDKN2DP55273 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.5□□□□□ -0.09
CDKN2DP55273 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.5□□□□□ -0.09
CDKN2DP55273 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CDKN2DP55273 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.5□□□□□ -0.09
CDKN2DP55273 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.5□□□□□ -0.09
CDKN2DP55273 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.5□□□□□ -0.09
CDKN2DP55273 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.5□□□□□ -0.09
CDKN2DP55273 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.5□□□□□ -0.09
CDKN2DP55273 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKN2DP55273 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CDKN2DP55273 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.5□□□□□ -0.09
CDKN2DP55273 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDKN2DP55273 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKN2DP55273 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
CDKN2DP55273 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKN2DP55273 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.5□□□□□ -0.09
CDKN2DP55273 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKN2DP55273 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.5□□□□□ -0.09
CDKN2DP55273 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKN2DP55273 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKN2DP55273 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDKN2DP55273 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKN2DP55273 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKN2DP55273 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKN2DP55273 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CDKN2DP55273 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CDKN2DP55273 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDKN2DP55273 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.5□□□□□ -0.09
CDKN2DP55273 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDKN2DP55273 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDKN2DP55273 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
CDKN2DP55273 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.49□□□□□ -0.09
CDKN2DP55273 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDKN2DP55273 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDKN2DP55273 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
CDKN2DP55273 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDKN2DP55273 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.49□□□□□ -0.09
CDKN2DP55273 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDKN2DP55273 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.49□□□□□ -0.09
CDKN2DP55273 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CDKN2DP55273 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CDKN2DP55273 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDKN2DP55273 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CDKN2DP55273 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDKN2DP55273 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDKN2DP55273 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CDKN2DP55273 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CDKN2DP55273 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDKN2DP55273 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms