Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H2P55055 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.06□□□□□ -0.16
NR1H2P55055 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H2P55055 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
NR1H2P55055 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H2P55055 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H2P55055 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H2P55055 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H2P55055 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H2P55055 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NR1H2P55055 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
NR1H2P55055 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NR1H2P55055 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NR1H2P55055 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NR1H2P55055 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NR1H2P55055 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NR1H2P55055 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NR1H2P55055 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.05□□□□□ -0.16
NR1H2P55055 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.05□□□□□ -0.16
NR1H2P55055 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.05□□□□□ -0.16
NR1H2P55055 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.05□□□□□ -0.16
NR1H2P55055 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.05□□□□□ -0.16
NR1H2P55055 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NR1H2P55055 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.05□□□□□ -0.16
NR1H2P55055 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NR1H2P55055 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
NR1H2P55055 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NR1H2P55055 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NR1H2P55055 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
NR1H2P55055 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NR1H2P55055 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.05□□□□□ -0.16
NR1H2P55055 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NR1H2P55055 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NR1H2P55055 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.05□□□□□ -0.16
NR1H2P55055 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.05□□□□□ -0.16
NR1H2P55055 AL139010.1-201ENST00000454878 894 ntBASIC14.05□□□□□ -0.16
NR1H2P55055 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.05□□□□□ -0.16
NR1H2P55055 AC135586.1-201ENST00000539323 574 ntBASIC14.05□□□□□ -0.16
NR1H2P55055 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.05□□□□□ -0.16
NR1H2P55055 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.05□□□□□ -0.16
NR1H2P55055 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
NR1H2P55055 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.05□□□□□ -0.16
NR1H2P55055 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.05□□□□□ -0.16
NR1H2P55055 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NR1H2P55055 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NR1H2P55055 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NR1H2P55055 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.05□□□□□ -0.16
NR1H2P55055 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NR1H2P55055 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NR1H2P55055 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NR1H2P55055 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NR1H2P55055 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NR1H2P55055 AL391825.1-201ENST00000457671 1364 ntBASIC14.05□□□□□ -0.16
NR1H2P55055 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NR1H2P55055 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NR1H2P55055 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.05□□□□□ -0.16
NR1H2P55055 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NR1H2P55055 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.05□□□□□ -0.16
NR1H2P55055 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
NR1H2P55055 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
NR1H2P55055 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
NR1H2P55055 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H2P55055 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.04□□□□□ -0.16
NR1H2P55055 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H2P55055 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H2P55055 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
NR1H2P55055 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H2P55055 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H2P55055 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H2P55055 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H2P55055 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H2P55055 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NR1H2P55055 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NR1H2P55055 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H2P55055 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H2P55055 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.04□□□□□ -0.16
NR1H2P55055 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H2P55055 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC14.04□□□□□ -0.16
NR1H2P55055 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NR1H2P55055 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
NR1H2P55055 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H2P55055 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H2P55055 AC087499.6-201ENST00000411576 835 ntBASIC14.04□□□□□ -0.16
NR1H2P55055 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.04□□□□□ -0.16
NR1H2P55055 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.04□□□□□ -0.16
NR1H2P55055 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.04□□□□□ -0.16
NR1H2P55055 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NR1H2P55055 AC009407.1-201ENST00000568958 598 ntBASIC14.04□□□□□ -0.16
NR1H2P55055 AC008738.7-201ENST00000609744 511 ntBASIC14.04□□□□□ -0.16
NR1H2P55055 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H2P55055 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H2P55055 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H2P55055 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
NR1H2P55055 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
NR1H2P55055 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
NR1H2P55055 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H2P55055 KRT8P12-202ENST00000472924 1397 ntBASIC14.04□□□□□ -0.16
NR1H2P55055 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H2P55055 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NR1H2P55055 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms