Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP13P45452 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MMP13P45452 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MMP13P45452 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
MMP13P45452 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
MMP13P45452 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
MMP13P45452 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
MMP13P45452 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
MMP13P45452 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MMP13P45452 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.33■□□□□ 0.05
MMP13P45452 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.33■□□□□ 0.05
MMP13P45452 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MMP13P45452 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
MMP13P45452 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
MMP13P45452 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
MMP13P45452 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.04
MMP13P45452 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.33■□□□□ 0.04
MMP13P45452 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
MMP13P45452 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.33■□□□□ 0.04
MMP13P45452 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.33■□□□□ 0.04
MMP13P45452 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.33■□□□□ 0.04
MMP13P45452 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MMP13P45452 AC245100.3-201ENST00000441281 285 ntBASIC15.33■□□□□ 0.04
MMP13P45452 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.33■□□□□ 0.04
MMP13P45452 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
MMP13P45452 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
MMP13P45452 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.33■□□□□ 0.04
MMP13P45452 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.33■□□□□ 0.04
MMP13P45452 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.33■□□□□ 0.04
MMP13P45452 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.33■□□□□ 0.04
MMP13P45452 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.33■□□□□ 0.04
MMP13P45452 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MMP13P45452 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.33■□□□□ 0.04
MMP13P45452 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
MMP13P45452 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
MMP13P45452 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.33■□□□□ 0.04
MMP13P45452 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.33■□□□□ 0.04
MMP13P45452 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MMP13P45452 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MMP13P45452 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MMP13P45452 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.33■□□□□ 0.04
MMP13P45452 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
MMP13P45452 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MMP13P45452 AGGF1P1-201ENST00000509500 2073 ntBASIC15.32■□□□□ 0.04
MMP13P45452 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.32■□□□□ 0.04
MMP13P45452 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MMP13P45452 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MMP13P45452 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
MMP13P45452 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MMP13P45452 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
MMP13P45452 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MMP13P45452 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
MMP13P45452 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.32■□□□□ 0.04
MMP13P45452 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
MMP13P45452 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.32■□□□□ 0.04
MMP13P45452 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.32■□□□□ 0.04
MMP13P45452 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MMP13P45452 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MMP13P45452 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MMP13P45452 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
MMP13P45452 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MMP13P45452 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
MMP13P45452 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
MMP13P45452 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.32■□□□□ 0.04
MMP13P45452 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.32■□□□□ 0.04
MMP13P45452 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.32■□□□□ 0.04
MMP13P45452 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MMP13P45452 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MMP13P45452 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
MMP13P45452 FTH1P14-201ENST00000482930 551 ntBASIC15.32■□□□□ 0.04
MMP13P45452 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
MMP13P45452 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
MMP13P45452 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
MMP13P45452 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.32■□□□□ 0.04
MMP13P45452 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
MMP13P45452 AC132938.4-201ENST00000623835 848 ntBASIC15.32■□□□□ 0.04
MMP13P45452 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MMP13P45452 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
MMP13P45452 AC063926.2-201ENST00000623766 1308 ntBASIC15.32■□□□□ 0.04
MMP13P45452 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
MMP13P45452 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MMP13P45452 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
MMP13P45452 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.32■□□□□ 0.04
MMP13P45452 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MMP13P45452 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MMP13P45452 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
MMP13P45452 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP13P45452 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP13P45452 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP13P45452 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
MMP13P45452 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP13P45452 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.31■□□□□ 0.04
MMP13P45452 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MMP13P45452 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MMP13P45452 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
MMP13P45452 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP13P45452 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP13P45452 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP13P45452 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MMP13P45452 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms