Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.43□□□□□ -0.1
TRIM23P36406 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIM23P36406 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIM23P36406 Z97180.1-201ENST00000445173 988 ntBASIC14.43□□□□□ -0.1
TRIM23P36406 AC006335.1-201ENST00000445200 547 ntBASIC14.43□□□□□ -0.1
TRIM23P36406 AL596276.2-201ENST00000447525 331 ntBASIC14.43□□□□□ -0.1
TRIM23P36406 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIM23P36406 MYADML-201ENST00000474610 2147 ntBASIC14.43□□□□□ -0.1
TRIM23P36406 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM23P36406 AC027237.1-201ENST00000560942 655 ntBASIC14.43□□□□□ -0.1
TRIM23P36406 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.43□□□□□ -0.1
TRIM23P36406 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.43□□□□□ -0.1
TRIM23P36406 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.43□□□□□ -0.1
TRIM23P36406 AC106872.11-201ENST00000605838 421 ntBASIC14.43□□□□□ -0.1
TRIM23P36406 AL021578.1-201ENST00000613646 709 ntBASIC14.43□□□□□ -0.1
TRIM23P36406 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.43□□□□□ -0.1
TRIM23P36406 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM23P36406 FAM45BP-202ENST00000592932 1624 ntBASIC14.43□□□□□ -0.1
TRIM23P36406 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIM23P36406 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM23P36406 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRIM23P36406 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM23P36406 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM23P36406 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIM23P36406 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM23P36406 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM23P36406 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM23P36406 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM23P36406 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM23P36406 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM23P36406 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM23P36406 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM23P36406 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRIM23P36406 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.42□□□□□ -0.1
TRIM23P36406 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
TRIM23P36406 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM23P36406 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TRIM23P36406 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.42□□□□□ -0.1
TRIM23P36406 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.42□□□□□ -0.1
TRIM23P36406 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TRIM23P36406 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM23P36406 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.42□□□□□ -0.1
TRIM23P36406 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM23P36406 AC106881.1-201ENST00000605849 3329 ntBASIC14.42□□□□□ -0.1
TRIM23P36406 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM23P36406 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM23P36406 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM23P36406 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM23P36406 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM23P36406 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.42□□□□□ -0.1
TRIM23P36406 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.42□□□□□ -0.1
TRIM23P36406 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.42□□□□□ -0.1
TRIM23P36406 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.42□□□□□ -0.1
TRIM23P36406 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM23P36406 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.42□□□□□ -0.1
TRIM23P36406 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
TRIM23P36406 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TRIM23P36406 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM23P36406 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.42□□□□□ -0.1
TRIM23P36406 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
TRIM23P36406 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.42□□□□□ -0.1
TRIM23P36406 AC097724.1-201ENST00000609581 426 ntBASIC14.42□□□□□ -0.1
TRIM23P36406 AL157813.1-201ENST00000612996 587 ntBASIC14.42□□□□□ -0.1
TRIM23P36406 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.42□□□□□ -0.1
TRIM23P36406 AC091812.3-201ENST00000621362 345 ntBASIC14.42□□□□□ -0.1
TRIM23P36406 CU633904.3-201ENST00000624042 1029 ntBASIC14.42□□□□□ -0.1
TRIM23P36406 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.42□□□□□ -0.1
TRIM23P36406 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.42□□□□□ -0.1
TRIM23P36406 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM23P36406 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.42□□□□□ -0.1
TRIM23P36406 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.42□□□□□ -0.1
TRIM23P36406 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM23P36406 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM23P36406 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM23P36406 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM23P36406 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TRIM23P36406 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TRIM23P36406 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM23P36406 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM23P36406 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM23P36406 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM23P36406 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM23P36406 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM23P36406 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM23P36406 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TRIM23P36406 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM23P36406 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM23P36406 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM23P36406 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM23P36406 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM23P36406 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM23P36406 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM23P36406 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM23P36406 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM23P36406 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM23P36406 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM23P36406 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
TRIM23P36406 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM23P36406 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM23P36406 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms