Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA3P29320 DNAJB3-202ENST00000449667 1266 ntBASIC14.37□□□□□ -0.11
EPHA3P29320 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
EPHA3P29320 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
EPHA3P29320 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA3P29320 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.37□□□□□ -0.11
EPHA3P29320 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.37□□□□□ -0.11
EPHA3P29320 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
EPHA3P29320 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.37□□□□□ -0.11
EPHA3P29320 AC138761.1-201ENST00000584393 385 ntBASIC14.37□□□□□ -0.11
EPHA3P29320 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.37□□□□□ -0.11
EPHA3P29320 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA3P29320 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA3P29320 AC015909.5-201ENST00000624336 2266 ntBASIC14.37□□□□□ -0.11
EPHA3P29320 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA3P29320 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
EPHA3P29320 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.37□□□□□ -0.11
EPHA3P29320 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA3P29320 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA3P29320 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
EPHA3P29320 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
EPHA3P29320 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA3P29320 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA3P29320 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA3P29320 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA3P29320 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA3P29320 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA3P29320 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA3P29320 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
EPHA3P29320 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
EPHA3P29320 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA3P29320 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
EPHA3P29320 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA3P29320 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
EPHA3P29320 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA3P29320 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA3P29320 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA3P29320 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA3P29320 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA3P29320 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.36□□□□□ -0.11
EPHA3P29320 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA3P29320 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA3P29320 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA3P29320 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA3P29320 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.36□□□□□ -0.11
EPHA3P29320 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.36□□□□□ -0.11
EPHA3P29320 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.36□□□□□ -0.11
EPHA3P29320 EIF3FP3-201ENST00000434851 1086 ntBASIC14.36□□□□□ -0.11
EPHA3P29320 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA3P29320 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA3P29320 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.36□□□□□ -0.11
EPHA3P29320 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.36□□□□□ -0.11
EPHA3P29320 RPL13AP25-201ENST00000484130 612 ntBASIC14.36□□□□□ -0.11
EPHA3P29320 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.36□□□□□ -0.11
EPHA3P29320 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.36□□□□□ -0.11
EPHA3P29320 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.36□□□□□ -0.11
EPHA3P29320 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
EPHA3P29320 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.36□□□□□ -0.11
EPHA3P29320 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.36□□□□□ -0.11
EPHA3P29320 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.36□□□□□ -0.11
EPHA3P29320 AC004790.1-201ENST00000612686 536 ntBASIC14.36□□□□□ -0.11
EPHA3P29320 AC007431.3-201ENST00000623221 587 ntBASIC14.36□□□□□ -0.11
EPHA3P29320 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA3P29320 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA3P29320 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA3P29320 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.36□□□□□ -0.11
EPHA3P29320 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA3P29320 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
EPHA3P29320 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.36□□□□□ -0.11
EPHA3P29320 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.36□□□□□ -0.11
EPHA3P29320 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA3P29320 AC019294.4-201ENST00000561777 2905 ntBASIC14.36□□□□□ -0.11
EPHA3P29320 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA3P29320 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA3P29320 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA3P29320 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA3P29320 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.36□□□□□ -0.11
EPHA3P29320 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.36□□□□□ -0.11
EPHA3P29320 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA3P29320 KRT8P35-201ENST00000483942 1338 ntBASIC14.36□□□□□ -0.11
EPHA3P29320 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.36□□□□□ -0.11
EPHA3P29320 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA3P29320 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA3P29320 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
EPHA3P29320 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA3P29320 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.35□□□□□ -0.11
EPHA3P29320 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
EPHA3P29320 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
EPHA3P29320 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA3P29320 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA3P29320 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA3P29320 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.35□□□□□ -0.11
EPHA3P29320 MIR497HG-202ENST00000572453 3838 ntBASIC14.35□□□□□ -0.11
EPHA3P29320 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.35□□□□□ -0.11
EPHA3P29320 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.35□□□□□ -0.11
EPHA3P29320 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA3P29320 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EPHA3P29320 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
EPHA3P29320 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.35□□□□□ -0.11
EPHA3P29320 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms