Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
COL8A2P25067 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
COL8A2P25067 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
COL8A2P25067 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.44□□□□□ -0.42
COL8A2P25067 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.44□□□□□ -0.42
COL8A2P25067 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
COL8A2P25067 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
COL8A2P25067 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
COL8A2P25067 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.44□□□□□ -0.42
COL8A2P25067 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
COL8A2P25067 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
COL8A2P25067 AL136172.1-201ENST00000598590 1394 ntBASIC12.43□□□□□ -0.42
COL8A2P25067 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COL8A2P25067 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COL8A2P25067 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
COL8A2P25067 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
COL8A2P25067 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COL8A2P25067 MRPL37P1-201ENST00000592451 1337 ntBASIC12.43□□□□□ -0.42
COL8A2P25067 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.43□□□□□ -0.42
COL8A2P25067 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
COL8A2P25067 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
COL8A2P25067 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.43□□□□□ -0.42
COL8A2P25067 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.43□□□□□ -0.42
COL8A2P25067 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.43□□□□□ -0.42
COL8A2P25067 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
COL8A2P25067 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COL8A2P25067 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
COL8A2P25067 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COL8A2P25067 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COL8A2P25067 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
COL8A2P25067 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.43□□□□□ -0.42
COL8A2P25067 AC012441.2-201ENST00000444843 739 ntBASIC12.43□□□□□ -0.42
COL8A2P25067 SPTLC1P5-201ENST00000450718 252 ntBASIC12.43□□□□□ -0.42
COL8A2P25067 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COL8A2P25067 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.43□□□□□ -0.42
COL8A2P25067 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
COL8A2P25067 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.43□□□□□ -0.42
COL8A2P25067 AC022217.1-201ENST00000521069 738 ntBASIC12.43□□□□□ -0.42
COL8A2P25067 SDHD-202ENST00000525291 790 ntTSL 3 BASIC12.43□□□□□ -0.42
COL8A2P25067 CSH2-206ENST00000560142 749 ntTSL 5 BASIC12.43□□□□□ -0.42
COL8A2P25067 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
COL8A2P25067 AC013355.1-201ENST00000562625 723 ntBASIC12.43□□□□□ -0.42
COL8A2P25067 SNORD3B-2-202ENST00000571722 791 ntBASIC12.43□□□□□ -0.42
COL8A2P25067 RN7SL774P-201ENST00000577467 290 ntBASIC12.43□□□□□ -0.42
COL8A2P25067 AC005962.1-201ENST00000584100 773 ntBASIC12.43□□□□□ -0.42
COL8A2P25067 AC008805.1-201ENST00000590892 364 ntBASIC12.43□□□□□ -0.42
COL8A2P25067 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.43□□□□□ -0.42
COL8A2P25067 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
COL8A2P25067 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COL8A2P25067 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
COL8A2P25067 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COL8A2P25067 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
COL8A2P25067 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
COL8A2P25067 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.43□□□□□ -0.42
COL8A2P25067 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COL8A2P25067 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.43□□□□□ -0.42
COL8A2P25067 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
COL8A2P25067 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COL8A2P25067 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
COL8A2P25067 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
COL8A2P25067 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COL8A2P25067 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
COL8A2P25067 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
COL8A2P25067 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
COL8A2P25067 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.43□□□□□ -0.42
COL8A2P25067 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
COL8A2P25067 MBLAC2-202ENST00000514906 1936 ntBASIC12.43□□□□□ -0.42
COL8A2P25067 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
COL8A2P25067 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
COL8A2P25067 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
COL8A2P25067 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
COL8A2P25067 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COL8A2P25067 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.42□□□□□ -0.42
COL8A2P25067 AC126755.1-201ENST00000525846 6405 ntBASIC12.42□□□□□ -0.42
COL8A2P25067 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
COL8A2P25067 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COL8A2P25067 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COL8A2P25067 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COL8A2P25067 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.42□□□□□ -0.42
COL8A2P25067 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
COL8A2P25067 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
COL8A2P25067 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COL8A2P25067 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
COL8A2P25067 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.42□□□□□ -0.42
COL8A2P25067 AC015656.1-201ENST00000624209 3578 ntBASIC12.42□□□□□ -0.42
COL8A2P25067 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
COL8A2P25067 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.42□□□□□ -0.42
COL8A2P25067 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.42□□□□□ -0.42
COL8A2P25067 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
COL8A2P25067 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
COL8A2P25067 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.42□□□□□ -0.42
COL8A2P25067 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
COL8A2P25067 MIR769-201ENST00000390225 118 ntBASIC12.42□□□□□ -0.42
COL8A2P25067 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COL8A2P25067 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
COL8A2P25067 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC12.42□□□□□ -0.42
COL8A2P25067 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.42□□□□□ -0.42
COL8A2P25067 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
COL8A2P25067 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
COL8A2P25067 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms