Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VAMP1P23763 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
VAMP1P23763 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.53□□□□□ -0.4
VAMP1P23763 AC007967.2-201ENST00000432613 625 ntBASIC12.53□□□□□ -0.4
VAMP1P23763 KRT18P2-201ENST00000447938 1258 ntBASIC12.53□□□□□ -0.4
VAMP1P23763 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VAMP1P23763 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.53□□□□□ -0.4
VAMP1P23763 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.53□□□□□ -0.4
VAMP1P23763 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.53□□□□□ -0.4
VAMP1P23763 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.53□□□□□ -0.4
VAMP1P23763 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VAMP1P23763 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
VAMP1P23763 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.53□□□□□ -0.4
VAMP1P23763 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.53□□□□□ -0.4
VAMP1P23763 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.53□□□□□ -0.4
VAMP1P23763 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.53□□□□□ -0.4
VAMP1P23763 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VAMP1P23763 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.53□□□□□ -0.4
VAMP1P23763 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.53□□□□□ -0.4
VAMP1P23763 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VAMP1P23763 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
VAMP1P23763 AC074044.1-201ENST00000609673 707 ntBASIC12.53□□□□□ -0.4
VAMP1P23763 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.53□□□□□ -0.4
VAMP1P23763 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.53□□□□□ -0.4
VAMP1P23763 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VAMP1P23763 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.53□□□□□ -0.4
VAMP1P23763 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VAMP1P23763 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.53□□□□□ -0.4
VAMP1P23763 AL360270.3-201ENST00000609118 1348 ntBASIC12.53□□□□□ -0.4
VAMP1P23763 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
VAMP1P23763 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VAMP1P23763 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VAMP1P23763 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC12.53□□□□□ -0.4
VAMP1P23763 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
VAMP1P23763 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VAMP1P23763 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VAMP1P23763 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.53□□□□□ -0.4
VAMP1P23763 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VAMP1P23763 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VAMP1P23763 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
VAMP1P23763 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
VAMP1P23763 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VAMP1P23763 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
VAMP1P23763 AC083964.2-201ENST00000623988 2396 ntBASIC12.52□□□□□ -0.4
VAMP1P23763 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
VAMP1P23763 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
VAMP1P23763 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
VAMP1P23763 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
VAMP1P23763 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.52□□□□□ -0.4
VAMP1P23763 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
VAMP1P23763 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.52□□□□□ -0.4
VAMP1P23763 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
VAMP1P23763 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
VAMP1P23763 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
VAMP1P23763 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
VAMP1P23763 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.52□□□□□ -0.4
VAMP1P23763 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.52□□□□□ -0.4
VAMP1P23763 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.52□□□□□ -0.4
VAMP1P23763 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.52□□□□□ -0.4
VAMP1P23763 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.52□□□□□ -0.4
VAMP1P23763 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VAMP1P23763 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.52□□□□□ -0.4
VAMP1P23763 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VAMP1P23763 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
VAMP1P23763 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VAMP1P23763 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VAMP1P23763 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VAMP1P23763 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VAMP1P23763 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
VAMP1P23763 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
VAMP1P23763 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
VAMP1P23763 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
VAMP1P23763 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VAMP1P23763 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.52□□□□□ -0.41
VAMP1P23763 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.52□□□□□ -0.41
VAMP1P23763 AC004945.1-201ENST00000416738 983 ntBASIC12.52□□□□□ -0.41
VAMP1P23763 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.52□□□□□ -0.41
VAMP1P23763 UBE2V2P4-201ENST00000447495 259 ntBASIC12.52□□□□□ -0.41
VAMP1P23763 KRT18P43-201ENST00000469825 1281 ntBASIC12.52□□□□□ -0.41
VAMP1P23763 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
VAMP1P23763 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.52□□□□□ -0.41
VAMP1P23763 HTR4-207ENST00000520514 1236 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VAMP1P23763 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.52□□□□□ -0.41
VAMP1P23763 SLC25A39P2-201ENST00000537614 270 ntBASIC12.52□□□□□ -0.41
VAMP1P23763 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
VAMP1P23763 KRT8P23-201ENST00000560090 1207 ntBASIC12.52□□□□□ -0.41
VAMP1P23763 AC243562.1-201ENST00000560672 389 ntBASIC12.52□□□□□ -0.41
VAMP1P23763 TPM1-226ENST00000560959 925 ntTSL 2 BASIC12.52□□□□□ -0.41
VAMP1P23763 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.52□□□□□ -0.41
VAMP1P23763 AC105021.1-202ENST00000570572 669 ntBASIC12.52□□□□□ -0.41
VAMP1P23763 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
VAMP1P23763 AC091812.2-201ENST00000619081 385 ntBASIC12.52□□□□□ -0.41
VAMP1P23763 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC12.52□□□□□ -0.41
VAMP1P23763 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
VAMP1P23763 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VAMP1P23763 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.52□□□□□ -0.41
VAMP1P23763 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
VAMP1P23763 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.52□□□□□ -0.41
VAMP1P23763 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
VAMP1P23763 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms