Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AL136309.1-201ENST00000403917 691 ntBASIC12.63□□□□□ -0.39
CCL1P22362 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL1P22362 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL1P22362 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.63□□□□□ -0.39
CCL1P22362 C2orf27AP3-201ENST00000434123 579 ntBASIC12.63□□□□□ -0.39
CCL1P22362 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL1P22362 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.63□□□□□ -0.39
CCL1P22362 AC007389.4-201ENST00000454674 793 ntBASIC12.63□□□□□ -0.39
CCL1P22362 CICP12-201ENST00000455801 843 ntBASIC12.63□□□□□ -0.39
CCL1P22362 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL1P22362 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.63□□□□□ -0.39
CCL1P22362 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.63□□□□□ -0.39
CCL1P22362 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL1P22362 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL1P22362 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL1P22362 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
CCL1P22362 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.63□□□□□ -0.39
CCL1P22362 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.63□□□□□ -0.39
CCL1P22362 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CCL1P22362 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.63□□□□□ -0.39
CCL1P22362 AC015936.2-201ENST00000593177 259 ntBASIC12.63□□□□□ -0.39
CCL1P22362 AL354718.3-201ENST00000616414 581 ntBASIC12.63□□□□□ -0.39
CCL1P22362 CR382287.1-201ENST00000623954 586 ntBASIC12.63□□□□□ -0.39
CCL1P22362 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL1P22362 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL1P22362 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL1P22362 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL1P22362 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL1P22362 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL1P22362 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL1P22362 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL1P22362 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL1P22362 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL1P22362 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
CCL1P22362 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL1P22362 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL1P22362 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL1P22362 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
CCL1P22362 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CCL1P22362 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL1P22362 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CCL1P22362 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL1P22362 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL1P22362 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL1P22362 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL1P22362 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CCL1P22362 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL1P22362 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CCL1P22362 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL1P22362 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
CCL1P22362 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL1P22362 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL1P22362 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCL1P22362 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL1P22362 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL1P22362 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CCL1P22362 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
CCL1P22362 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCL1P22362 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL1P22362 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL1P22362 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL1P22362 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CCL1P22362 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
CCL1P22362 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.62□□□□□ -0.39
CCL1P22362 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL1P22362 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CCL1P22362 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
CCL1P22362 AL157996.1-201ENST00000624684 2299 ntBASIC12.62□□□□□ -0.39
CCL1P22362 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCL1P22362 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.62□□□□□ -0.39
CCL1P22362 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.62□□□□□ -0.39
CCL1P22362 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCL1P22362 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL1P22362 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CCL1P22362 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL1P22362 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CCL1P22362 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.62□□□□□ -0.39
CCL1P22362 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.62□□□□□ -0.39
CCL1P22362 AL590640.2-201ENST00000457038 527 ntBASIC12.62□□□□□ -0.39
CCL1P22362 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.62□□□□□ -0.39
CCL1P22362 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.62□□□□□ -0.39
CCL1P22362 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.62□□□□□ -0.39
CCL1P22362 USP32P1-208ENST00000506594 1164 ntBASIC12.62□□□□□ -0.39
CCL1P22362 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.62□□□□□ -0.39
CCL1P22362 POLD4-211ENST00000539074 714 ntTSL 3 BASIC12.62□□□□□ -0.39
CCL1P22362 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL1P22362 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.62□□□□□ -0.39
CCL1P22362 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.62□□□□□ -0.39
CCL1P22362 MIR4683-201ENST00000579659 81 ntBASIC12.62□□□□□ -0.39
CCL1P22362 RN7SL713P-201ENST00000582127 302 ntBASIC12.62□□□□□ -0.39
CCL1P22362 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.62□□□□□ -0.39
CCL1P22362 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL1P22362 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCL1P22362 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCL1P22362 AC027601.3-201ENST00000622907 509 ntBASIC12.62□□□□□ -0.39
CCL1P22362 AC006453.4-201ENST00000636949 1252 ntBASIC12.62□□□□□ -0.39
CCL1P22362 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.62□□□□□ -0.39
CCL1P22362 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL1P22362 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL1P22362 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms