Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA3P22001 PIFO-201ENST00000369737 746 ntTSL 2 BASIC17.64■□□□□ 0.41
KCNA3P22001 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
KCNA3P22001 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC17.64■□□□□ 0.41
KCNA3P22001 KRT18P4-201ENST00000422599 1288 ntBASIC17.64■□□□□ 0.41
KCNA3P22001 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC17.64■□□□□ 0.41
KCNA3P22001 AC104961.1-201ENST00000427605 771 ntBASIC17.64■□□□□ 0.41
KCNA3P22001 AL512599.1-201ENST00000430724 685 ntBASIC17.64■□□□□ 0.41
KCNA3P22001 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC17.64■□□□□ 0.41
KCNA3P22001 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA3P22001 AC092896.1-201ENST00000465850 380 ntBASIC17.64■□□□□ 0.41
KCNA3P22001 EEF1GP8-201ENST00000506566 1154 ntBASIC17.64■□□□□ 0.41
KCNA3P22001 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA3P22001 AC113347.2-201ENST00000512350 279 ntBASIC17.64■□□□□ 0.41
KCNA3P22001 AC005740.1-201ENST00000515639 522 ntBASIC17.64■□□□□ 0.41
KCNA3P22001 DLK1-205ENST00000556051 469 ntTSL 2 BASIC17.64■□□□□ 0.41
KCNA3P22001 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC17.64■□□□□ 0.41
KCNA3P22001 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC17.64■□□□□ 0.41
KCNA3P22001 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC17.64■□□□□ 0.41
KCNA3P22001 AL359091.4-201ENST00000610052 409 ntBASIC17.64■□□□□ 0.41
KCNA3P22001 CR392039.1-201ENST00000623217 204 ntBASIC17.64■□□□□ 0.41
KCNA3P22001 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC17.64■□□□□ 0.41
KCNA3P22001 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.64■□□□□ 0.41
KCNA3P22001 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA3P22001 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA3P22001 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA3P22001 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA3P22001 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
KCNA3P22001 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA3P22001 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA3P22001 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNA3P22001 FKBP4P8-201ENST00000610931 1369 ntBASIC17.64■□□□□ 0.41
KCNA3P22001 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC17.64■□□□□ 0.41
KCNA3P22001 AC138761.6-201ENST00000583997 1423 ntBASIC17.64■□□□□ 0.41
KCNA3P22001 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA3P22001 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
KCNA3P22001 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
KCNA3P22001 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA3P22001 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
KCNA3P22001 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.63■□□□□ 0.41
KCNA3P22001 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.63■□□□□ 0.41
KCNA3P22001 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA3P22001 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA3P22001 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA3P22001 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA3P22001 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA3P22001 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.63■□□□□ 0.41
KCNA3P22001 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA3P22001 SNX15-201ENST00000352068 771 ntTSL 5 BASIC17.63■□□□□ 0.41
KCNA3P22001 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
KCNA3P22001 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC17.63■□□□□ 0.41
KCNA3P22001 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC17.63■□□□□ 0.41
KCNA3P22001 RN7SL147P-201ENST00000487345 298 ntBASIC17.63■□□□□ 0.41
KCNA3P22001 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC17.63■□□□□ 0.41
KCNA3P22001 AC087203.1-201ENST00000532111 1181 ntBASIC17.63■□□□□ 0.41
KCNA3P22001 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
KCNA3P22001 PMEL-214ENST00000550447 901 ntTSL 3 BASIC17.63■□□□□ 0.41
KCNA3P22001 HNRNPA1P5-201ENST00000558213 966 ntBASIC17.63■□□□□ 0.41
KCNA3P22001 FBXO36P1-201ENST00000579006 471 ntBASIC17.63■□□□□ 0.41
KCNA3P22001 AC090510.3-201ENST00000615831 821 ntBASIC17.63■□□□□ 0.41
KCNA3P22001 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA3P22001 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA3P22001 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA3P22001 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA3P22001 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA3P22001 WASH7P-201ENST00000488147 1351 ntBASIC17.63■□□□□ 0.41
KCNA3P22001 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC17.63■□□□□ 0.41
KCNA3P22001 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA3P22001 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA3P22001 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA3P22001 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC17.63■□□□□ 0.41
KCNA3P22001 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA3P22001 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA3P22001 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KCNA3P22001 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA3P22001 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA3P22001 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA3P22001 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC17.62■□□□□ 0.41
KCNA3P22001 AC126365.1-201ENST00000578585 1514 ntBASIC17.62■□□□□ 0.41
KCNA3P22001 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA3P22001 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.62■□□□□ 0.41
KCNA3P22001 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA3P22001 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA3P22001 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA3P22001 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.62■□□□□ 0.41
KCNA3P22001 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.62■□□□□ 0.41
KCNA3P22001 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA3P22001 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA3P22001 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
KCNA3P22001 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA3P22001 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA3P22001 AL157823.1-201ENST00000403727 628 ntBASIC17.62■□□□□ 0.41
KCNA3P22001 HNRNPA1P2-207ENST00000432375 960 ntBASIC17.62■□□□□ 0.41
KCNA3P22001 STK24P1-201ENST00000455035 1291 ntBASIC17.62■□□□□ 0.41
KCNA3P22001 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
KCNA3P22001 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
KCNA3P22001 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA3P22001 CES1P2-201ENST00000566467 1242 ntBASIC17.62■□□□□ 0.41
KCNA3P22001 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KCNA3P22001 AC005274.1-201ENST00000623460 802 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms