Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATF1P18846 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
ATF1P18846 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATF1P18846 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ATF1P18846 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATF1P18846 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATF1P18846 AC004945.1-201ENST00000416738 983 ntBASIC12.97□□□□□ -0.33
ATF1P18846 MEP1AP4-201ENST00000423244 1087 ntBASIC12.97□□□□□ -0.33
ATF1P18846 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATF1P18846 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATF1P18846 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.97□□□□□ -0.33
ATF1P18846 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.97□□□□□ -0.33
ATF1P18846 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATF1P18846 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.97□□□□□ -0.33
ATF1P18846 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATF1P18846 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
ATF1P18846 AL390955.2-201ENST00000603032 514 ntBASIC12.97□□□□□ -0.33
ATF1P18846 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.97□□□□□ -0.33
ATF1P18846 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.97□□□□□ -0.33
ATF1P18846 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.97□□□□□ -0.33
ATF1P18846 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.97□□□□□ -0.33
ATF1P18846 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.97□□□□□ -0.33
ATF1P18846 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATF1P18846 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATF1P18846 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATF1P18846 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.97□□□□□ -0.33
ATF1P18846 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
ATF1P18846 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATF1P18846 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
ATF1P18846 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATF1P18846 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATF1P18846 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.97□□□□□ -0.33
ATF1P18846 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATF1P18846 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.97□□□□□ -0.33
ATF1P18846 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
ATF1P18846 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ATF1P18846 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATF1P18846 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATF1P18846 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATF1P18846 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ATF1P18846 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
ATF1P18846 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
ATF1P18846 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
ATF1P18846 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ATF1P18846 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ATF1P18846 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.96□□□□□ -0.33
ATF1P18846 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
ATF1P18846 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
ATF1P18846 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATF1P18846 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATF1P18846 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.96□□□□□ -0.33
ATF1P18846 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
ATF1P18846 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.96□□□□□ -0.33
ATF1P18846 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATF1P18846 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATF1P18846 AGAP10P-201ENST00000454844 2418 ntBASIC12.96□□□□□ -0.33
ATF1P18846 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
ATF1P18846 SPDYE19P-201ENST00000338590 713 ntBASIC12.96□□□□□ -0.33
ATF1P18846 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.96□□□□□ -0.33
ATF1P18846 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.96□□□□□ -0.33
ATF1P18846 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATF1P18846 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.96□□□□□ -0.33
ATF1P18846 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.96□□□□□ -0.33
ATF1P18846 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.96□□□□□ -0.33
ATF1P18846 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.96□□□□□ -0.33
ATF1P18846 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.96□□□□□ -0.33
ATF1P18846 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ATF1P18846 RRP7BP-205ENST00000566851 833 ntBASIC12.96□□□□□ -0.33
ATF1P18846 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.96□□□□□ -0.33
ATF1P18846 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.96□□□□□ -0.33
ATF1P18846 BRI3BPP1-201ENST00000594224 787 ntBASIC12.96□□□□□ -0.33
ATF1P18846 AC004790.1-201ENST00000612686 536 ntBASIC12.96□□□□□ -0.33
ATF1P18846 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
ATF1P18846 AC093512.1-201ENST00000617969 520 ntBASIC12.96□□□□□ -0.33
ATF1P18846 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.96□□□□□ -0.33
ATF1P18846 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
ATF1P18846 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATF1P18846 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATF1P18846 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.96□□□□□ -0.33
ATF1P18846 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
ATF1P18846 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATF1P18846 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
ATF1P18846 HSPA8P5-201ENST00000456928 2069 ntBASIC12.96□□□□□ -0.33
ATF1P18846 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.96□□□□□ -0.33
ATF1P18846 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
ATF1P18846 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
ATF1P18846 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ATF1P18846 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
ATF1P18846 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
ATF1P18846 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
ATF1P18846 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
ATF1P18846 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
ATF1P18846 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.96□□□□□ -0.34
ATF1P18846 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATF1P18846 AC215219.1-201ENST00000400706 1817 ntBASIC12.95□□□□□ -0.34
ATF1P18846 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.95□□□□□ -0.34
ATF1P18846 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATF1P18846 AC011498.7-201ENST00000624986 2027 ntBASIC12.95□□□□□ -0.34
ATF1P18846 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
ATF1P18846 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms