Protein–RNA interactions for Protein: P17544

ATF7, Cyclic AMP-dependent transcription factor ATF-7, humanhuman

Predicted RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF7P17544 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
ATF7P17544 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
ATF7P17544 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATF7P17544 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.18■□□□□ 0.18
ATF7P17544 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATF7P17544 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
ATF7P17544 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF7P17544 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF7P17544 AC013726.1-201ENST00000563747 2285 ntBASIC16.17■□□□□ 0.18
ATF7P17544 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATF7P17544 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATF7P17544 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF7P17544 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ATF7P17544 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
ATF7P17544 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF7P17544 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.17■□□□□ 0.18
ATF7P17544 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF7P17544 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
ATF7P17544 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF7P17544 AC008132.1-202ENST00000342005 1389 ntBASIC16.17■□□□□ 0.18
ATF7P17544 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF7P17544 AJ011931.1-201ENST00000618749 2492 ntBASIC16.17■□□□□ 0.18
ATF7P17544 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.17■□□□□ 0.18
ATF7P17544 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.17■□□□□ 0.18
ATF7P17544 RN7SL574P-201ENST00000581512 297 ntBASIC16.17■□□□□ 0.18
ATF7P17544 RN7SL163P-201ENST00000583100 276 ntBASIC16.17■□□□□ 0.18
ATF7P17544 AC132192.2-201ENST00000596206 1147 ntBASIC16.17■□□□□ 0.18
ATF7P17544 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATF7P17544 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.17■□□□□ 0.18
ATF7P17544 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF7P17544 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC16.17■□□□□ 0.18
ATF7P17544 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF7P17544 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
ATF7P17544 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.17■□□□□ 0.18
ATF7P17544 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF7P17544 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ATF7P17544 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF7P17544 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
ATF7P17544 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATF7P17544 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF7P17544 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF7P17544 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.16■□□□□ 0.18
ATF7P17544 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF7P17544 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.16■□□□□ 0.18
ATF7P17544 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF7P17544 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.16■□□□□ 0.18
ATF7P17544 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.16■□□□□ 0.18
ATF7P17544 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.16■□□□□ 0.18
ATF7P17544 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.16■□□□□ 0.18
ATF7P17544 FGD5P1-202ENST00000614866 2498 ntBASIC16.16■□□□□ 0.18
ATF7P17544 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
ATF7P17544 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATF7P17544 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATF7P17544 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.16■□□□□ 0.18
ATF7P17544 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ATF7P17544 MIR33B-201ENST00000385104 96 ntBASIC16.16■□□□□ 0.18
ATF7P17544 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATF7P17544 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATF7P17544 FTLP1-201ENST00000449155 526 ntBASIC16.16■□□□□ 0.18
ATF7P17544 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.16■□□□□ 0.18
ATF7P17544 RPL18P13-201ENST00000478088 569 ntBASIC16.16■□□□□ 0.18
ATF7P17544 AC106794.1-201ENST00000506935 792 ntBASIC16.16■□□□□ 0.18
ATF7P17544 MARK2P5-201ENST00000507649 634 ntBASIC16.16■□□□□ 0.18
ATF7P17544 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.16■□□□□ 0.18
ATF7P17544 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
ATF7P17544 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.16■□□□□ 0.18
ATF7P17544 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
ATF7P17544 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATF7P17544 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
ATF7P17544 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.16■□□□□ 0.18
ATF7P17544 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF7P17544 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF7P17544 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF7P17544 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF7P17544 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF7P17544 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.16■□□□□ 0.18
ATF7P17544 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
ATF7P17544 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
ATF7P17544 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF7P17544 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.16■□□□□ 0.18
ATF7P17544 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.16■□□□□ 0.18
ATF7P17544 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF7P17544 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.16■□□□□ 0.18
ATF7P17544 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF7P17544 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ATF7P17544 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
ATF7P17544 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF7P17544 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF7P17544 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF7P17544 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.15■□□□□ 0.18
ATF7P17544 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATF7P17544 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATF7P17544 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.15■□□□□ 0.18
ATF7P17544 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.15■□□□□ 0.18
ATF7P17544 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATF7P17544 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATF7P17544 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.15■□□□□ 0.18
ATF7P17544 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ATF7P17544 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.15■□□□□ 0.18
ATF7P17544 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms