Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
CCL4P13236 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CCL4P13236 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.75□□□□□ -0.21
CCL4P13236 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL4P13236 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL4P13236 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL4P13236 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.75□□□□□ -0.21
CCL4P13236 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCL4P13236 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.75□□□□□ -0.21
CCL4P13236 AC012362.1-201ENST00000434906 739 ntBASIC13.75□□□□□ -0.21
CCL4P13236 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCL4P13236 AC018463.1-201ENST00000456674 917 ntBASIC13.75□□□□□ -0.21
CCL4P13236 ORAOV1P1-201ENST00000503108 395 ntBASIC13.75□□□□□ -0.21
CCL4P13236 CD164-210ENST00000512821 964 ntTSL 2 BASIC13.75□□□□□ -0.21
CCL4P13236 CTBP2P4-201ENST00000513884 920 ntBASIC13.75□□□□□ -0.21
CCL4P13236 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCL4P13236 POLD4-208ENST00000532830 904 ntTSL 3 BASIC13.75□□□□□ -0.21
CCL4P13236 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC13.75□□□□□ -0.21
CCL4P13236 MT3-203ENST00000565838 421 ntTSL 3 BASIC13.75□□□□□ -0.21
CCL4P13236 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC13.75□□□□□ -0.21
CCL4P13236 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC13.75□□□□□ -0.21
CCL4P13236 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL4P13236 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CCL4P13236 MIR6858-201ENST00000620733 67 ntBASIC13.75□□□□□ -0.21
CCL4P13236 AC073911.3-201ENST00000624401 631 ntBASIC13.75□□□□□ -0.21
CCL4P13236 AC005618.3-201ENST00000624928 458 ntBASIC13.75□□□□□ -0.21
CCL4P13236 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL4P13236 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCL4P13236 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL4P13236 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL4P13236 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL4P13236 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL4P13236 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL4P13236 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.75□□□□□ -0.21
CCL4P13236 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL4P13236 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL4P13236 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL4P13236 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCL4P13236 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.75□□□□□ -0.21
CCL4P13236 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CCL4P13236 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.75□□□□□ -0.21
CCL4P13236 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CCL4P13236 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.74□□□□□ -0.21
CCL4P13236 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CCL4P13236 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL4P13236 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL4P13236 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CCL4P13236 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL4P13236 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CCL4P13236 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL4P13236 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CCL4P13236 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL4P13236 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL4P13236 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.74□□□□□ -0.21
CCL4P13236 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC13.74□□□□□ -0.21
CCL4P13236 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CCL4P13236 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL4P13236 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL4P13236 AC025271.4-201ENST00000621477 1726 ntBASIC13.74□□□□□ -0.21
CCL4P13236 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL4P13236 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL4P13236 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.74□□□□□ -0.21
CCL4P13236 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CCL4P13236 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.74□□□□□ -0.21
CCL4P13236 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CCL4P13236 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC13.74□□□□□ -0.21
CCL4P13236 HIST2H2BA-201ENST00000412169 381 ntBASIC13.74□□□□□ -0.21
CCL4P13236 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CCL4P13236 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CCL4P13236 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC13.74□□□□□ -0.21
CCL4P13236 BUD31-205ENST00000456893 512 ntTSL 5 BASIC13.74□□□□□ -0.21
CCL4P13236 IGHV3-37-201ENST00000518544 340 ntBASIC13.74□□□□□ -0.21
CCL4P13236 KRT8P1-201ENST00000557533 1207 ntBASIC13.74□□□□□ -0.21
CCL4P13236 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC13.74□□□□□ -0.21
CCL4P13236 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.74□□□□□ -0.21
CCL4P13236 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL4P13236 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL4P13236 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CCL4P13236 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL4P13236 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CCL4P13236 AC018442.1-201ENST00000421439 2061 ntBASIC13.74□□□□□ -0.21
CCL4P13236 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL4P13236 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CCL4P13236 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.74□□□□□ -0.21
CCL4P13236 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL4P13236 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.74□□□□□ -0.21
CCL4P13236 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL4P13236 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CCL4P13236 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL4P13236 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.74□□□□□ -0.21
CCL4P13236 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL4P13236 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CCL4P13236 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL4P13236 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL4P13236 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL4P13236 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.74□□□□□ -0.21
CCL4P13236 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CCL4P13236 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CCL4P13236 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CCL4P13236 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms