Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 AC007274.2-201ENST00000421675 662 ntBASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 AL157407.1-201ENST00000435784 904 ntBASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 AL596276.2-201ENST00000447525 331 ntBASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 SCARNA21-201ENST00000517026 139 ntBASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 AC090857.1-201ENST00000527400 390 ntBASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 FGFR3P5-201ENST00000564496 886 ntBASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 AC005962.1-201ENST00000584100 773 ntBASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 MBLAC2-202ENST00000514906 1936 ntBASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 AC078875.1-201ENST00000431907 724 ntBASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 AC134698.3-201ENST00000523880 214 ntBASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 AL353770.1-201ENST00000614915 403 ntBASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 AC079336.7-201ENST00000623428 1078 ntBASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 RETN-203ENST00000629642 400 ntTSL 5 BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB40ALP0C0E4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB40ALP0C0E4 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms