Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.83□□□□□ -0.04
RETP07949 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RETP07949 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RETP07949 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RETP07949 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.83□□□□□ -0.04
RETP07949 OR2K2-202ENST00000374428 1038 ntBASIC14.83□□□□□ -0.04
RETP07949 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RETP07949 RN7SKP175-201ENST00000408472 289 ntBASIC14.83□□□□□ -0.04
RETP07949 AC010141.1-201ENST00000411585 623 ntBASIC14.83□□□□□ -0.04
RETP07949 IDS-203ENST00000428056 1213 ntTSL 2 BASIC14.83□□□□□ -0.04
RETP07949 AC026320.2-201ENST00000434379 478 ntBASIC14.83□□□□□ -0.04
RETP07949 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.83□□□□□ -0.04
RETP07949 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC14.83□□□□□ -0.04
RETP07949 AC018463.1-201ENST00000456674 917 ntBASIC14.83□□□□□ -0.04
RETP07949 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC14.83□□□□□ -0.04
RETP07949 NSD1-211ENST00000511258 809 ntTSL 3 BASIC14.83□□□□□ -0.04
RETP07949 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RETP07949 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.83□□□□□ -0.04
RETP07949 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC14.83□□□□□ -0.04
RETP07949 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC14.83□□□□□ -0.04
RETP07949 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.83□□□□□ -0.04
RETP07949 AC004466.1-201ENST00000599515 1080 ntBASIC14.83□□□□□ -0.04
RETP07949 AC005632.3-201ENST00000605544 308 ntBASIC14.83□□□□□ -0.04
RETP07949 AC007881.3-201ENST00000608897 607 ntBASIC14.83□□□□□ -0.04
RETP07949 AL132780.4-201ENST00000624870 1135 ntBASIC14.83□□□□□ -0.04
RETP07949 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RETP07949 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RETP07949 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RETP07949 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RETP07949 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RETP07949 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.83□□□□□ -0.04
RETP07949 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.83□□□□□ -0.04
RETP07949 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RETP07949 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RETP07949 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
RETP07949 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RETP07949 CAP2P1-201ENST00000557743 1390 ntBASIC14.83□□□□□ -0.04
RETP07949 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RETP07949 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
RETP07949 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.83□□□□□ -0.04
RETP07949 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RETP07949 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RETP07949 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RETP07949 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RETP07949 E2F3P2-201ENST00000447755 1422 ntBASIC14.83□□□□□ -0.04
RETP07949 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.82□□□□□ -0.04
RETP07949 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RETP07949 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.82□□□□□ -0.04
RETP07949 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RETP07949 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RETP07949 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RETP07949 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RETP07949 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.82□□□□□ -0.04
RETP07949 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RETP07949 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RETP07949 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RETP07949 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RETP07949 AJ011931.1-201ENST00000618749 2492 ntBASIC14.82□□□□□ -0.04
RETP07949 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RETP07949 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.82□□□□□ -0.04
RETP07949 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RETP07949 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.82□□□□□ -0.04
RETP07949 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RETP07949 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RETP07949 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC14.82□□□□□ -0.04
RETP07949 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RETP07949 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RETP07949 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC14.82□□□□□ -0.04
RETP07949 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RETP07949 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC14.82□□□□□ -0.04
RETP07949 DUX4L47-201ENST00000566374 394 ntBASIC14.82□□□□□ -0.04
RETP07949 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RETP07949 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.82□□□□□ -0.04
RETP07949 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC14.82□□□□□ -0.04
RETP07949 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.82□□□□□ -0.04
RETP07949 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RETP07949 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RETP07949 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RETP07949 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RETP07949 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RETP07949 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RETP07949 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RETP07949 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RETP07949 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RETP07949 KRT8P21-201ENST00000430398 1491 ntBASIC14.82□□□□□ -0.04
RETP07949 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RETP07949 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.81□□□□□ -0.04
RETP07949 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RETP07949 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RETP07949 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RETP07949 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RETP07949 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
RETP07949 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RETP07949 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.81□□□□□ -0.04
RETP07949 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RETP07949 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RETP07949 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RETP07949 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RETP07949 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RETP07949 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms