Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 CTBP2P8-201ENST00000422584 1330 ntBASIC15.38■□□□□ 0.05
RB1P06400 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.38■□□□□ 0.05
RB1P06400 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.38■□□□□ 0.05
RB1P06400 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RB1P06400 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RB1P06400 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC15.38■□□□□ 0.05
RB1P06400 C18orf15-201ENST00000623680 2534 ntBASIC15.38■□□□□ 0.05
RB1P06400 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RB1P06400 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RB1P06400 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RB1P06400 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RB1P06400 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RB1P06400 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RB1P06400 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
RB1P06400 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC15.37■□□□□ 0.05
RB1P06400 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RB1P06400 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RB1P06400 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
RB1P06400 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.37■□□□□ 0.05
RB1P06400 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RB1P06400 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RB1P06400 KHSRPP1-201ENST00000427983 1768 ntBASIC15.37■□□□□ 0.05
RB1P06400 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RB1P06400 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RB1P06400 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.37■□□□□ 0.05
RB1P06400 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
RB1P06400 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.37■□□□□ 0.05
RB1P06400 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RB1P06400 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC15.37■□□□□ 0.05
RB1P06400 CELP-201ENST00000411440 1249 ntTSL 5 BASIC15.37■□□□□ 0.05
RB1P06400 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC15.37■□□□□ 0.05
RB1P06400 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC15.37■□□□□ 0.05
RB1P06400 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC15.37■□□□□ 0.05
RB1P06400 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC15.37■□□□□ 0.05
RB1P06400 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC15.37■□□□□ 0.05
RB1P06400 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC15.37■□□□□ 0.05
RB1P06400 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC15.37■□□□□ 0.05
RB1P06400 ELP5-212ENST00000574255 671 ntTSL 2 BASIC15.37■□□□□ 0.05
RB1P06400 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.37■□□□□ 0.05
RB1P06400 AC021016.3-201ENST00000608367 477 ntBASIC15.37■□□□□ 0.05
RB1P06400 AC009145.4-201ENST00000625119 1294 ntBASIC15.37■□□□□ 0.05
RB1P06400 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RB1P06400 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.37■□□□□ 0.05
RB1P06400 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.37■□□□□ 0.05
RB1P06400 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RB1P06400 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RB1P06400 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RB1P06400 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.37■□□□□ 0.05
RB1P06400 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
RB1P06400 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
RB1P06400 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC15.37■□□□□ 0.05
RB1P06400 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RB1P06400 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RB1P06400 AC105917.1-201ENST00000506637 2539 ntBASIC15.37■□□□□ 0.05
RB1P06400 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.37■□□□□ 0.05
RB1P06400 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RB1P06400 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RB1P06400 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.36■□□□□ 0.05
RB1P06400 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RB1P06400 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RB1P06400 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RB1P06400 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RB1P06400 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RB1P06400 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RB1P06400 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RB1P06400 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RB1P06400 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RB1P06400 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RB1P06400 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RB1P06400 OR8T1P-201ENST00000421347 918 ntBASIC15.36■□□□□ 0.05
RB1P06400 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC15.36■□□□□ 0.05
RB1P06400 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RB1P06400 FAU-202ENST00000434372 533 ntTSL 2 BASIC15.36■□□□□ 0.05
RB1P06400 GNG10P1-201ENST00000452289 199 ntBASIC15.36■□□□□ 0.05
RB1P06400 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC15.36■□□□□ 0.05
RB1P06400 RN7SL767P-201ENST00000493013 295 ntBASIC15.36■□□□□ 0.05
RB1P06400 AC093909.3-201ENST00000504783 336 ntBASIC15.36■□□□□ 0.05
RB1P06400 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.36■□□□□ 0.05
RB1P06400 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
RB1P06400 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC15.36■□□□□ 0.05
RB1P06400 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC15.36■□□□□ 0.05
RB1P06400 AC055811.3-201ENST00000584952 686 ntBASIC15.36■□□□□ 0.05
RB1P06400 MIR6746-201ENST00000620971 63 ntBASIC15.36■□□□□ 0.05
RB1P06400 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RB1P06400 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RB1P06400 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.36■□□□□ 0.05
RB1P06400 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.36■□□□□ 0.05
RB1P06400 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.36■□□□□ 0.05
RB1P06400 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.36■□□□□ 0.05
RB1P06400 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RB1P06400 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RB1P06400 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
RB1P06400 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RB1P06400 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
RB1P06400 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RB1P06400 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.36■□□□□ 0.05
RB1P06400 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RB1P06400 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RB1P06400 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RB1P06400 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms