Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
COL5A2P05997 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
COL5A2P05997 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC18.77■□□□□ 0.59
COL5A2P05997 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC18.77■□□□□ 0.59
COL5A2P05997 AC104961.1-201ENST00000427605 771 ntBASIC18.77■□□□□ 0.59
COL5A2P05997 NRADDP-201ENST00000437305 691 ntBASIC18.77■□□□□ 0.59
COL5A2P05997 GOLGA6L16P-201ENST00000441780 1299 ntBASIC18.77■□□□□ 0.59
COL5A2P05997 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC18.77■□□□□ 0.59
COL5A2P05997 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC18.77■□□□□ 0.59
COL5A2P05997 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC18.77■□□□□ 0.59
COL5A2P05997 BCRP4-201ENST00000506079 804 ntBASIC18.77■□□□□ 0.59
COL5A2P05997 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
COL5A2P05997 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
COL5A2P05997 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC18.77■□□□□ 0.59
COL5A2P05997 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC18.77■□□□□ 0.59
COL5A2P05997 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC18.77■□□□□ 0.59
COL5A2P05997 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
COL5A2P05997 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC18.76■□□□□ 0.59
COL5A2P05997 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
COL5A2P05997 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL5A2P05997 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC18.76■□□□□ 0.59
COL5A2P05997 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC18.76■□□□□ 0.59
COL5A2P05997 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL5A2P05997 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.76■□□□□ 0.59
COL5A2P05997 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.76■□□□□ 0.59
COL5A2P05997 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL5A2P05997 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL5A2P05997 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL5A2P05997 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC18.76■□□□□ 0.59
COL5A2P05997 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL5A2P05997 AC232323.1-201ENST00000540724 2099 ntBASIC18.76■□□□□ 0.59
COL5A2P05997 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.76■□□□□ 0.59
COL5A2P05997 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
COL5A2P05997 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
COL5A2P05997 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL5A2P05997 ABCD1P4-201ENST00000399687 604 ntBASIC18.76■□□□□ 0.59
COL5A2P05997 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL5A2P05997 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC18.76■□□□□ 0.59
COL5A2P05997 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC18.76■□□□□ 0.59
COL5A2P05997 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
COL5A2P05997 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC18.76■□□□□ 0.59
COL5A2P05997 AC023906.1-201ENST00000486386 453 ntBASIC18.76■□□□□ 0.59
COL5A2P05997 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC18.76■□□□□ 0.59
COL5A2P05997 IGHEP1-201ENST00000521393 651 ntBASIC18.76■□□□□ 0.59
COL5A2P05997 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
COL5A2P05997 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC18.76■□□□□ 0.59
COL5A2P05997 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC18.76■□□□□ 0.59
COL5A2P05997 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
COL5A2P05997 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC18.76■□□□□ 0.59
COL5A2P05997 AC073869.4-201ENST00000620841 800 ntBASIC18.76■□□□□ 0.59
COL5A2P05997 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL5A2P05997 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL5A2P05997 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL5A2P05997 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
COL5A2P05997 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC18.75■□□□□ 0.59
COL5A2P05997 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL5A2P05997 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC18.75■□□□□ 0.59
COL5A2P05997 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL5A2P05997 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL5A2P05997 TBC1D27-202ENST00000424239 1573 ntBASIC18.75■□□□□ 0.59
COL5A2P05997 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
COL5A2P05997 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.75■□□□□ 0.59
COL5A2P05997 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL5A2P05997 AC008894.3-201ENST00000624324 3103 ntBASIC18.75■□□□□ 0.59
COL5A2P05997 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL5A2P05997 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.75■□□□□ 0.59
COL5A2P05997 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL5A2P05997 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.75■□□□□ 0.59
COL5A2P05997 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL5A2P05997 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC18.75■□□□□ 0.59
COL5A2P05997 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC18.75■□□□□ 0.59
COL5A2P05997 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC18.75■□□□□ 0.59
COL5A2P05997 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL5A2P05997 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL5A2P05997 AP000244.1-201ENST00000424582 201 ntBASIC18.75■□□□□ 0.59
COL5A2P05997 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC18.75■□□□□ 0.59
COL5A2P05997 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
COL5A2P05997 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC18.75■□□□□ 0.59
COL5A2P05997 AC100858.1-201ENST00000514059 1228 ntBASIC18.75■□□□□ 0.59
COL5A2P05997 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC18.75■□□□□ 0.59
COL5A2P05997 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC18.75■□□□□ 0.59
COL5A2P05997 GGNBP1-204ENST00000613113 887 ntBASIC18.75■□□□□ 0.59
COL5A2P05997 ESR1-214ENST00000638569 132 ntTSL 5 BASIC18.75■□□□□ 0.59
COL5A2P05997 LINC00554-201ENST00000564841 3011 ntBASIC18.75■□□□□ 0.59
COL5A2P05997 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
COL5A2P05997 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
COL5A2P05997 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
COL5A2P05997 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL5A2P05997 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL5A2P05997 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC18.75■□□□□ 0.59
COL5A2P05997 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL5A2P05997 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL5A2P05997 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL5A2P05997 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL5A2P05997 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC18.74■□□□□ 0.59
COL5A2P05997 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
COL5A2P05997 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL5A2P05997 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.74■□□□□ 0.59
COL5A2P05997 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
COL5A2P05997 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms