Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 AC006064.1-201ENST00000499202 560 ntTSL 4 BASIC17.56■□□□□ 0.4
MYCNP04198 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.56■□□□□ 0.4
MYCNP04198 PTPN20-219ENST00000508602 742 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MYCNP04198 PTPN20-221ENST00000509599 945 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MYCNP04198 PTPN20-222ENST00000509774 788 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MYCNP04198 PTPN20-223ENST00000509900 693 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MYCNP04198 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.56■□□□□ 0.4
MYCNP04198 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MYCNP04198 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC17.56■□□□□ 0.4
MYCNP04198 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MYCNP04198 AC004816.1-202ENST00000557691 629 ntTSL 2 BASIC17.56■□□□□ 0.4
MYCNP04198 ACTG1P17-201ENST00000558391 1119 ntBASIC17.56■□□□□ 0.4
MYCNP04198 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.56■□□□□ 0.4
MYCNP04198 AL034376.2-201ENST00000568110 573 ntTSL 2 BASIC17.56■□□□□ 0.4
MYCNP04198 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.56■□□□□ 0.4
MYCNP04198 SETP3-201ENST00000581726 813 ntBASIC17.56■□□□□ 0.4
MYCNP04198 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
MYCNP04198 PPATP2-201ENST00000605635 508 ntBASIC17.56■□□□□ 0.4
MYCNP04198 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC17.56■□□□□ 0.4
MYCNP04198 AL138955.1-201ENST00000622881 1040 ntBASIC17.56■□□□□ 0.4
MYCNP04198 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.56■□□□□ 0.4
MYCNP04198 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MYCNP04198 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC17.56■□□□□ 0.4
MYCNP04198 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.56■□□□□ 0.4
MYCNP04198 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MYCNP04198 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.56■□□□□ 0.4
MYCNP04198 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MYCNP04198 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MYCNP04198 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MYCNP04198 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
MYCNP04198 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MYCNP04198 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MYCNP04198 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MYCNP04198 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
MYCNP04198 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MYCNP04198 IL15-203ENST00000394159 1545 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MYCNP04198 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MYCNP04198 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MYCNP04198 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MYCNP04198 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MYCNP04198 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
MYCNP04198 AC018892.3-201ENST00000623986 2499 ntBASIC17.56■□□□□ 0.4
MYCNP04198 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
MYCNP04198 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.56■□□□□ 0.4
MYCNP04198 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MYCNP04198 AL513548.1-201ENST00000562904 1724 ntBASIC17.55■□□□□ 0.4
MYCNP04198 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MYCNP04198 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MYCNP04198 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
MYCNP04198 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
MYCNP04198 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MYCNP04198 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
MYCNP04198 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC17.55■□□□□ 0.4
MYCNP04198 ALOX12P2-203ENST00000570921 1945 ntBASIC17.55■□□□□ 0.4
MYCNP04198 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MYCNP04198 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.55■□□□□ 0.4
MYCNP04198 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MYCNP04198 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MYCNP04198 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MYCNP04198 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MYCNP04198 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
MYCNP04198 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MYCNP04198 MIR122-201ENST00000385044 85 ntBASIC17.55■□□□□ 0.4
MYCNP04198 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
MYCNP04198 NIFKP1-201ENST00000398317 889 ntBASIC17.55■□□□□ 0.4
MYCNP04198 MTND4LP20-201ENST00000402379 270 ntBASIC17.55■□□□□ 0.4
MYCNP04198 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.55■□□□□ 0.4
MYCNP04198 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
MYCNP04198 MIR1202-201ENST00000408529 83 ntBASIC17.55■□□□□ 0.4
MYCNP04198 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC17.55■□□□□ 0.4
MYCNP04198 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC17.55■□□□□ 0.4
MYCNP04198 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.55■□□□□ 0.4
MYCNP04198 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.55■□□□□ 0.4
MYCNP04198 HYI-AS1-201ENST00000444386 545 ntTSL 2 BASIC17.55■□□□□ 0.4
MYCNP04198 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.55■□□□□ 0.4
MYCNP04198 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC17.55■□□□□ 0.4
MYCNP04198 AC022137.2-201ENST00000503482 481 ntBASIC17.55■□□□□ 0.4
MYCNP04198 AC080079.1-201ENST00000509326 1045 ntBASIC17.55■□□□□ 0.4
MYCNP04198 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
MYCNP04198 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC17.55■□□□□ 0.4
MYCNP04198 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
MYCNP04198 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.55■□□□□ 0.4
MYCNP04198 SRD5A3-AS1-212ENST00000601433 754 ntTSL 5 BASIC17.55■□□□□ 0.4
MYCNP04198 AC107373.2-201ENST00000607735 490 ntBASIC17.55■□□□□ 0.4
MYCNP04198 AC119674.1-220ENST00000641502 1048 ntBASIC17.55■□□□□ 0.4
MYCNP04198 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
MYCNP04198 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MYCNP04198 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MYCNP04198 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC17.55■□□□□ 0.4
MYCNP04198 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.55■□□□□ 0.4
MYCNP04198 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
MYCNP04198 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
MYCNP04198 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.55■□□□□ 0.4
MYCNP04198 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
MYCNP04198 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.55■□□□□ 0.4
MYCNP04198 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MYCNP04198 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MYCNP04198 COX16-201ENST00000389912 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MYCNP04198 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.55■□□□□ 0.4
MYCNP04198 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms