Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.19□□□□□ -0.3
APOA1P02647 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOA1P02647 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
APOA1P02647 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOA1P02647 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
APOA1P02647 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOA1P02647 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC13.19□□□□□ -0.3
APOA1P02647 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
APOA1P02647 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOA1P02647 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.19□□□□□ -0.3
APOA1P02647 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
APOA1P02647 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
APOA1P02647 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.19□□□□□ -0.3
APOA1P02647 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOA1P02647 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
APOA1P02647 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOA1P02647 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
APOA1P02647 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOA1P02647 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOA1P02647 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.18□□□□□ -0.3
APOA1P02647 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOA1P02647 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APOA1P02647 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOA1P02647 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.18□□□□□ -0.3
APOA1P02647 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOA1P02647 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOA1P02647 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.18□□□□□ -0.3
APOA1P02647 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOA1P02647 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC13.18□□□□□ -0.3
APOA1P02647 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APOA1P02647 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOA1P02647 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
APOA1P02647 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOA1P02647 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APOA1P02647 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.18□□□□□ -0.3
APOA1P02647 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.18□□□□□ -0.3
APOA1P02647 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.18□□□□□ -0.3
APOA1P02647 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.18□□□□□ -0.3
APOA1P02647 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOA1P02647 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.18□□□□□ -0.3
APOA1P02647 PRR29-207ENST00000580752 458 ntTSL 3 BASIC13.18□□□□□ -0.3
APOA1P02647 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.18□□□□□ -0.3
APOA1P02647 AC068137.2-201ENST00000605408 478 ntBASIC13.18□□□□□ -0.3
APOA1P02647 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.18□□□□□ -0.3
APOA1P02647 AC004877.2-201ENST00000623941 599 ntBASIC13.18□□□□□ -0.3
APOA1P02647 FAM215A-202ENST00000632077 792 ntBASIC13.18□□□□□ -0.3
APOA1P02647 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOA1P02647 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.18□□□□□ -0.3
APOA1P02647 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.18□□□□□ -0.3
APOA1P02647 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOA1P02647 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.18□□□□□ -0.3
APOA1P02647 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOA1P02647 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APOA1P02647 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.18□□□□□ -0.3
APOA1P02647 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APOA1P02647 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOA1P02647 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC13.18□□□□□ -0.3
APOA1P02647 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
APOA1P02647 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.18□□□□□ -0.3
APOA1P02647 DLX4-206ENST00000611342 1662 ntBASIC13.18□□□□□ -0.3
APOA1P02647 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
APOA1P02647 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
APOA1P02647 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOA1P02647 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOA1P02647 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC13.17□□□□□ -0.3
APOA1P02647 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOA1P02647 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOA1P02647 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOA1P02647 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.17□□□□□ -0.3
APOA1P02647 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.17□□□□□ -0.3
APOA1P02647 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOA1P02647 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOA1P02647 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOA1P02647 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
APOA1P02647 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOA1P02647 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOA1P02647 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOA1P02647 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOA1P02647 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOA1P02647 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
APOA1P02647 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOA1P02647 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.17□□□□□ -0.3
APOA1P02647 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
APOA1P02647 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.17□□□□□ -0.3
APOA1P02647 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOA1P02647 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOA1P02647 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOA1P02647 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.17□□□□□ -0.3
APOA1P02647 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.17□□□□□ -0.3
APOA1P02647 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOA1P02647 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
APOA1P02647 FO393414.2-201ENST00000405153 598 ntBASIC13.17□□□□□ -0.3
APOA1P02647 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.17□□□□□ -0.3
APOA1P02647 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
APOA1P02647 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.17□□□□□ -0.3
APOA1P02647 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.17□□□□□ -0.3
APOA1P02647 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOA1P02647 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
APOA1P02647 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC13.17□□□□□ -0.3
APOA1P02647 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms