Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC16.13■□□□□ 0.17
CD4P01730 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD4P01730 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CD4P01730 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.13■□□□□ 0.17
CD4P01730 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC16.13■□□□□ 0.17
CD4P01730 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD4P01730 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CD4P01730 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
CD4P01730 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CD4P01730 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.13■□□□□ 0.17
CD4P01730 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.13■□□□□ 0.17
CD4P01730 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD4P01730 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD4P01730 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CD4P01730 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD4P01730 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD4P01730 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD4P01730 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD4P01730 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.13■□□□□ 0.17
CD4P01730 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CD4P01730 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.13■□□□□ 0.17
CD4P01730 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.13■□□□□ 0.17
CD4P01730 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD4P01730 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.12■□□□□ 0.17
CD4P01730 AGAP7P-201ENST00000582299 2062 ntBASIC16.12■□□□□ 0.17
CD4P01730 AGAP14-201ENST00000624701 2060 ntBASIC16.12■□□□□ 0.17
CD4P01730 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD4P01730 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD4P01730 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD4P01730 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.12■□□□□ 0.17
CD4P01730 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD4P01730 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD4P01730 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CD4P01730 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC16.12■□□□□ 0.17
CD4P01730 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CD4P01730 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CD4P01730 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD4P01730 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD4P01730 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CD4P01730 HLA-DMA-203ENST00000395305 777 ntBASIC16.12■□□□□ 0.17
CD4P01730 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CD4P01730 DUX4L50-201ENST00000455245 715 ntBASIC16.12■□□□□ 0.17
CD4P01730 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CD4P01730 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.12■□□□□ 0.17
CD4P01730 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CD4P01730 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC16.12■□□□□ 0.17
CD4P01730 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CD4P01730 NUDT4P2-201ENST00000578341 546 ntBASIC16.12■□□□□ 0.17
CD4P01730 MIR3180-2-201ENST00000581748 88 ntBASIC16.12■□□□□ 0.17
CD4P01730 AL022334.2-201ENST00000610000 484 ntBASIC16.12■□□□□ 0.17
CD4P01730 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD4P01730 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CD4P01730 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD4P01730 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CD4P01730 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CD4P01730 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD4P01730 AC091951.1-201ENST00000512854 2465 ntBASIC16.12■□□□□ 0.17
CD4P01730 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CD4P01730 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CD4P01730 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.12■□□□□ 0.17
CD4P01730 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CD4P01730 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CD4P01730 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CD4P01730 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD4P01730 IL9RP3-201ENST00000442856 1674 ntBASIC16.11■□□□□ 0.17
CD4P01730 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CD4P01730 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CD4P01730 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CD4P01730 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD4P01730 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.11■□□□□ 0.17
CD4P01730 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD4P01730 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.11■□□□□ 0.17
CD4P01730 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD4P01730 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CD4P01730 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD4P01730 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.11■□□□□ 0.17
CD4P01730 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.11■□□□□ 0.17
CD4P01730 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
CD4P01730 AL357563.1-201ENST00000404728 395 ntBASIC16.11■□□□□ 0.17
CD4P01730 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.11■□□□□ 0.17
CD4P01730 AC092638.2-201ENST00000441105 947 ntBASIC16.11■□□□□ 0.17
CD4P01730 AL354861.1-201ENST00000445213 355 ntBASIC16.11■□□□□ 0.17
CD4P01730 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC16.11■□□□□ 0.17
CD4P01730 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC16.11■□□□□ 0.17
CD4P01730 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.11■□□□□ 0.17
CD4P01730 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC16.11■□□□□ 0.17
CD4P01730 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD4P01730 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.11■□□□□ 0.17
CD4P01730 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.11■□□□□ 0.17
CD4P01730 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.11■□□□□ 0.17
CD4P01730 AC005041.3-201ENST00000606287 649 ntBASIC16.11■□□□□ 0.17
CD4P01730 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.11■□□□□ 0.17
CD4P01730 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CD4P01730 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.11■□□□□ 0.17
CD4P01730 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CD4P01730 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
CD4P01730 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD4P01730 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CD4P01730 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CD4P01730 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms