Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.25□□□□□ -0.13
CLDN9O95484 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
CLDN9O95484 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.25□□□□□ -0.13
CLDN9O95484 FAM8A4P-201ENST00000435433 1213 ntBASIC14.25□□□□□ -0.13
CLDN9O95484 BCRP2-202ENST00000447763 634 ntBASIC14.25□□□□□ -0.13
CLDN9O95484 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.25□□□□□ -0.13
CLDN9O95484 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN9O95484 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.25□□□□□ -0.13
CLDN9O95484 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.25□□□□□ -0.13
CLDN9O95484 BCRP6-201ENST00000510112 632 ntBASIC14.25□□□□□ -0.13
CLDN9O95484 BCRP7-201ENST00000511549 544 ntBASIC14.25□□□□□ -0.13
CLDN9O95484 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.25□□□□□ -0.13
CLDN9O95484 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
CLDN9O95484 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN9O95484 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.25□□□□□ -0.13
CLDN9O95484 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.25□□□□□ -0.13
CLDN9O95484 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CLDN9O95484 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CLDN9O95484 AL022328.1-201ENST00000610050 478 ntBASIC14.25□□□□□ -0.13
CLDN9O95484 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN9O95484 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN9O95484 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN9O95484 AC005840.4-201ENST00000541242 2494 ntBASIC14.25□□□□□ -0.13
CLDN9O95484 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN9O95484 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN9O95484 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN9O95484 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN9O95484 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN9O95484 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN9O95484 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN9O95484 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN9O95484 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN9O95484 TCAM1P-207ENST00000485295 1537 ntBASIC14.25□□□□□ -0.13
CLDN9O95484 MST1P2-201ENST00000457982 2291 ntBASIC14.25□□□□□ -0.13
CLDN9O95484 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN9O95484 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN9O95484 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
CLDN9O95484 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN9O95484 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN9O95484 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN9O95484 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.24□□□□□ -0.13
CLDN9O95484 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.24□□□□□ -0.13
CLDN9O95484 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN9O95484 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.24□□□□□ -0.13
CLDN9O95484 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN9O95484 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN9O95484 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN9O95484 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.24□□□□□ -0.13
CLDN9O95484 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN9O95484 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.24□□□□□ -0.13
CLDN9O95484 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN9O95484 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN9O95484 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN9O95484 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN9O95484 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
CLDN9O95484 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
CLDN9O95484 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN9O95484 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.24□□□□□ -0.13
CLDN9O95484 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.24□□□□□ -0.13
CLDN9O95484 RN7SL692P-201ENST00000464677 288 ntBASIC14.24□□□□□ -0.13
CLDN9O95484 USP32P1-208ENST00000506594 1164 ntBASIC14.24□□□□□ -0.13
CLDN9O95484 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN9O95484 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
CLDN9O95484 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN9O95484 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.24□□□□□ -0.13
CLDN9O95484 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN9O95484 SORD2P-201ENST00000558556 1069 ntBASIC14.24□□□□□ -0.13
CLDN9O95484 AC233724.13-201ENST00000598383 410 ntBASIC14.24□□□□□ -0.13
CLDN9O95484 OR10B1P-201ENST00000601666 907 ntBASIC14.24□□□□□ -0.13
CLDN9O95484 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.24□□□□□ -0.13
CLDN9O95484 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN9O95484 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN9O95484 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CLDN9O95484 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.24□□□□□ -0.13
CLDN9O95484 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CLDN9O95484 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN9O95484 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN9O95484 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN9O95484 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.24□□□□□ -0.13
CLDN9O95484 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN9O95484 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN9O95484 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN9O95484 AC011474.4-201ENST00000623523 2076 ntBASIC14.24□□□□□ -0.13
CLDN9O95484 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN9O95484 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN9O95484 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN9O95484 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
CLDN9O95484 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.24□□□□□ -0.13
CLDN9O95484 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN9O95484 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CLDN9O95484 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.24□□□□□ -0.13
CLDN9O95484 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN9O95484 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN9O95484 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN9O95484 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN9O95484 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN9O95484 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN9O95484 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
CLDN9O95484 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN9O95484 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms