Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-2O95096 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-2O95096 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX2-2O95096 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.53□□□□□ -0.24
NKX2-2O95096 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-2O95096 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
NKX2-2O95096 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
NKX2-2O95096 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-2O95096 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
NKX2-2O95096 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-2O95096 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.53□□□□□ -0.24
NKX2-2O95096 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.53□□□□□ -0.24
NKX2-2O95096 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-2O95096 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-2O95096 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-2O95096 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX2-2O95096 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.53□□□□□ -0.24
NKX2-2O95096 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-2O95096 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
NKX2-2O95096 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.53□□□□□ -0.24
NKX2-2O95096 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-2O95096 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.53□□□□□ -0.24
NKX2-2O95096 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX2-2O95096 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
NKX2-2O95096 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX2-2O95096 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
NKX2-2O95096 MIR4259-201ENST00000584466 101 ntBASIC13.53□□□□□ -0.24
NKX2-2O95096 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX2-2O95096 MIR6805-201ENST00000615055 62 ntBASIC13.53□□□□□ -0.24
NKX2-2O95096 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-2O95096 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
NKX2-2O95096 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-2O95096 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-2O95096 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-2O95096 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-2O95096 AC117489.1-201ENST00000625169 3217 ntBASIC13.53□□□□□ -0.24
NKX2-2O95096 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-2O95096 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-2O95096 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
NKX2-2O95096 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX2-2O95096 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX2-2O95096 TMBIM7P-202ENST00000641474 1516 ntBASIC13.53□□□□□ -0.24
NKX2-2O95096 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.53□□□□□ -0.24
NKX2-2O95096 AC244394.1-201ENST00000435000 1665 ntBASIC13.53□□□□□ -0.24
NKX2-2O95096 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.53□□□□□ -0.24
NKX2-2O95096 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-2O95096 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NKX2-2O95096 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
NKX2-2O95096 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NKX2-2O95096 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
NKX2-2O95096 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NKX2-2O95096 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
NKX2-2O95096 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
NKX2-2O95096 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.52□□□□□ -0.24
NKX2-2O95096 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.24
NKX2-2O95096 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
NKX2-2O95096 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NKX2-2O95096 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.52□□□□□ -0.24
NKX2-2O95096 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
NKX2-2O95096 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
NKX2-2O95096 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.24
NKX2-2O95096 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NKX2-2O95096 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NKX2-2O95096 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
NKX2-2O95096 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NKX2-2O95096 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
NKX2-2O95096 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.52□□□□□ -0.25
NKX2-2O95096 MIR658-201ENST00000385210 100 ntBASIC13.52□□□□□ -0.25
NKX2-2O95096 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX2-2O95096 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NKX2-2O95096 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
NKX2-2O95096 AL354877.1-201ENST00000424412 413 ntBASIC13.52□□□□□ -0.25
NKX2-2O95096 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.52□□□□□ -0.25
NKX2-2O95096 FAM58BP-201ENST00000439056 645 ntBASIC13.52□□□□□ -0.25
NKX2-2O95096 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NKX2-2O95096 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.52□□□□□ -0.25
NKX2-2O95096 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.52□□□□□ -0.25
NKX2-2O95096 RNA5SP412-201ENST00000516234 123 ntBASIC13.52□□□□□ -0.25
NKX2-2O95096 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.52□□□□□ -0.25
NKX2-2O95096 IGHV3-71-201ENST00000523324 359 ntBASIC13.52□□□□□ -0.25
NKX2-2O95096 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.52□□□□□ -0.25
NKX2-2O95096 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.52□□□□□ -0.25
NKX2-2O95096 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.52□□□□□ -0.25
NKX2-2O95096 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.52□□□□□ -0.25
NKX2-2O95096 MIR4741-201ENST00000579822 90 ntBASIC13.52□□□□□ -0.25
NKX2-2O95096 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
NKX2-2O95096 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.52□□□□□ -0.25
NKX2-2O95096 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
NKX2-2O95096 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NKX2-2O95096 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX2-2O95096 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NKX2-2O95096 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.52□□□□□ -0.25
NKX2-2O95096 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
NKX2-2O95096 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
NKX2-2O95096 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
NKX2-2O95096 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NKX2-2O95096 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX2-2O95096 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NKX2-2O95096 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
NKX2-2O95096 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms