Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC6.33□□□□□ -1.4
USH2AO75445 LINC02447-202ENST00000501888 2146 ntBASIC6.33□□□□□ -1.4
USH2AO75445 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC6.33□□□□□ -1.4
USH2AO75445 AC005014.1-201ENST00000432006 2976 ntBASIC6.33□□□□□ -1.4
USH2AO75445 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC6.33□□□□□ -1.4
USH2AO75445 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC6.33□□□□□ -1.4
USH2AO75445 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC6.33□□□□□ -1.4
USH2AO75445 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
USH2AO75445 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC6.33□□□□□ -1.4
USH2AO75445 AP000244.1-201ENST00000424582 201 ntBASIC6.33□□□□□ -1.4
USH2AO75445 CCND3P1-201ENST00000438347 580 ntBASIC6.33□□□□□ -1.4
USH2AO75445 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC6.33□□□□□ -1.4
USH2AO75445 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC6.33□□□□□ -1.4
USH2AO75445 AC005740.1-201ENST00000515639 522 ntBASIC6.33□□□□□ -1.4
USH2AO75445 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC6.33□□□□□ -1.4
USH2AO75445 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC6.33□□□□□ -1.4
USH2AO75445 AC032044.1-201ENST00000570924 570 ntTSL 4 BASIC6.33□□□□□ -1.4
USH2AO75445 RPS5-205ENST00000598495 800 ntTSL 3 BASIC6.33□□□□□ -1.4
USH2AO75445 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC6.33□□□□□ -1.4
USH2AO75445 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC6.33□□□□□ -1.4
USH2AO75445 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC6.33□□□□□ -1.4
USH2AO75445 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC6.33□□□□□ -1.4
USH2AO75445 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC6.33□□□□□ -1.4
USH2AO75445 PXK-210ENST00000479241 2817 ntTSL 2 BASIC6.33□□□□□ -1.4
USH2AO75445 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
USH2AO75445 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC6.33□□□□□ -1.4
USH2AO75445 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 MRPL23-203ENST00000397294 551 ntTSL 4 BASIC6.33□□□□□ -1.4
USH2AO75445 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC6.33□□□□□ -1.4
USH2AO75445 RN7SL477P-201ENST00000488440 286 ntBASIC6.33□□□□□ -1.4
USH2AO75445 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC6.33□□□□□ -1.4
USH2AO75445 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC6.33□□□□□ -1.4
USH2AO75445 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC6.33□□□□□ -1.4
USH2AO75445 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC6.33□□□□□ -1.4
USH2AO75445 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC6.33□□□□□ -1.4
USH2AO75445 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
USH2AO75445 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 AL031590.1-202ENST00000641466 1737 ntBASIC6.33□□□□□ -1.4
USH2AO75445 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
USH2AO75445 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC6.33□□□□□ -1.4
USH2AO75445 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
USH2AO75445 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
USH2AO75445 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
USH2AO75445 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC6.33□□□□□ -1.4
USH2AO75445 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
USH2AO75445 MIR648-201ENST00000385046 94 ntBASIC6.33□□□□□ -1.4
USH2AO75445 APRT-202ENST00000426324 664 ntTSL 2 BASIC6.33□□□□□ -1.4
USH2AO75445 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC6.33□□□□□ -1.4
USH2AO75445 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 AL035414.1-201ENST00000451327 857 ntBASIC6.33□□□□□ -1.4
USH2AO75445 CETN3-205ENST00000522842 664 ntTSL 2 BASIC6.33□□□□□ -1.4
USH2AO75445 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC6.33□□□□□ -1.4
USH2AO75445 TYMSP2-201ENST00000589501 424 ntBASIC6.33□□□□□ -1.4
USH2AO75445 AL133467.4-201ENST00000602953 725 ntBASIC6.33□□□□□ -1.4
USH2AO75445 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC6.33□□□□□ -1.4
USH2AO75445 MECP2-226ENST00000640414 897 ntTSL 5 BASIC6.33□□□□□ -1.4
USH2AO75445 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC6.33□□□□□ -1.4
USH2AO75445 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 AC022532.1-201ENST00000624563 1728 ntBASIC6.33□□□□□ -1.4
USH2AO75445 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC6.33□□□□□ -1.4
USH2AO75445 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 BID-213ENST00000615414 2236 ntTSL 5 BASIC6.33□□□□□ -1.4
USH2AO75445 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
USH2AO75445 TRIQK-219ENST00000523580 1630 ntTSL 2 BASIC6.33□□□□□ -1.4
USH2AO75445 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms