Protein–RNA interactions for Protein: O60488

ACSL4, Long-chain-fatty-acid--CoA ligase 4, humanhuman

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL4O60488 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ACSL4O60488 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ACSL4O60488 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.1■□□□□ 0.01
ACSL4O60488 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ACSL4O60488 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.1■□□□□ 0.01
ACSL4O60488 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
ACSL4O60488 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ACSL4O60488 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.1■□□□□ 0.01
ACSL4O60488 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ACSL4O60488 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.1■□□□□ 0.01
ACSL4O60488 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ACSL4O60488 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.1■□□□□ 0.01
ACSL4O60488 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.1■□□□□ 0.01
ACSL4O60488 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.1■□□□□ 0.01
ACSL4O60488 AC009779.1-201ENST00000551138 283 ntBASIC15.1■□□□□ 0.01
ACSL4O60488 ACTG1P17-201ENST00000558391 1119 ntBASIC15.1■□□□□ 0.01
ACSL4O60488 AC027237.1-201ENST00000560942 655 ntBASIC15.1■□□□□ 0.01
ACSL4O60488 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ACSL4O60488 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.1■□□□□ 0.01
ACSL4O60488 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ACSL4O60488 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.1■□□□□ 0.01
ACSL4O60488 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.1■□□□□ 0.01
ACSL4O60488 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
ACSL4O60488 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ACSL4O60488 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.1■□□□□ 0.01
ACSL4O60488 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
ACSL4O60488 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
ACSL4O60488 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.1■□□□□ 0.01
ACSL4O60488 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ACSL4O60488 AL122018.1-201ENST00000446607 2310 ntBASIC15.1■□□□□ 0.01
ACSL4O60488 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
ACSL4O60488 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ACSL4O60488 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ACSL4O60488 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ACSL4O60488 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ACSL4O60488 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ACSL4O60488 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.1■□□□□ 0.01
ACSL4O60488 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ACSL4O60488 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.1■□□□□ 0.01
ACSL4O60488 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
ACSL4O60488 AC113367.3-201ENST00000508316 1912 ntBASIC15.09■□□□□ 0.01
ACSL4O60488 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.09■□□□□ 0.01
ACSL4O60488 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.09■□□□□ 0.01
ACSL4O60488 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
ACSL4O60488 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ACSL4O60488 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACSL4O60488 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
ACSL4O60488 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.09■□□□□ 0.01
ACSL4O60488 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
ACSL4O60488 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ACSL4O60488 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACSL4O60488 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACSL4O60488 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACSL4O60488 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACSL4O60488 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
ACSL4O60488 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACSL4O60488 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ACSL4O60488 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACSL4O60488 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACSL4O60488 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ACSL4O60488 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACSL4O60488 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ACSL4O60488 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
ACSL4O60488 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.09■□□□□ 0.01
ACSL4O60488 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACSL4O60488 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.09■□□□□ 0.01
ACSL4O60488 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.09■□□□□ 0.01
ACSL4O60488 AL008707.1-201ENST00000422498 534 ntBASIC15.09■□□□□ 0.01
ACSL4O60488 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.09■□□□□ 0.01
ACSL4O60488 AC005077.2-201ENST00000449786 690 ntBASIC15.09■□□□□ 0.01
ACSL4O60488 TPT1P11-201ENST00000458482 498 ntBASIC15.09■□□□□ 0.01
ACSL4O60488 AC125604.1-201ENST00000496255 707 ntBASIC15.09■□□□□ 0.01
ACSL4O60488 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ACSL4O60488 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.09■□□□□ 0.01
ACSL4O60488 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.09■□□□□ 0.01
ACSL4O60488 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.09■□□□□ 0.01
ACSL4O60488 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.09■□□□□ 0.01
ACSL4O60488 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACSL4O60488 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACSL4O60488 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ACSL4O60488 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACSL4O60488 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACSL4O60488 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.09■□□□□ 0.01
ACSL4O60488 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACSL4O60488 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACSL4O60488 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACSL4O60488 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
ACSL4O60488 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACSL4O60488 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
ACSL4O60488 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACSL4O60488 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.09■□□□□ 0.01
ACSL4O60488 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.09■□□□□ 0.01
ACSL4O60488 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ACSL4O60488 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ACSL4O60488 INTS4P1-203ENST00000641008 3683 ntBASIC15.08■□□□□ 0.01
ACSL4O60488 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
ACSL4O60488 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0.01
ACSL4O60488 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ACSL4O60488 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
ACSL4O60488 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms