Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.06□□□□□ -0.48
SSSCA1O60232 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.06□□□□□ -0.48
SSSCA1O60232 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.06□□□□□ -0.48
SSSCA1O60232 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.06□□□□□ -0.48
SSSCA1O60232 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
SSSCA1O60232 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.06□□□□□ -0.48
SSSCA1O60232 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SSSCA1O60232 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SSSCA1O60232 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SSSCA1O60232 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SSSCA1O60232 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
SSSCA1O60232 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SSSCA1O60232 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SSSCA1O60232 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SSSCA1O60232 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.06□□□□□ -0.48
SSSCA1O60232 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SSSCA1O60232 SPDYE14P-201ENST00000442619 822 ntBASIC12.06□□□□□ -0.48
SSSCA1O60232 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.06□□□□□ -0.48
SSSCA1O60232 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SSSCA1O60232 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.06□□□□□ -0.48
SSSCA1O60232 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.06□□□□□ -0.48
SSSCA1O60232 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.06□□□□□ -0.48
SSSCA1O60232 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.06□□□□□ -0.48
SSSCA1O60232 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SSSCA1O60232 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.06□□□□□ -0.48
SSSCA1O60232 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SSSCA1O60232 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.06□□□□□ -0.48
SSSCA1O60232 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.06□□□□□ -0.48
SSSCA1O60232 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.06□□□□□ -0.48
SSSCA1O60232 AC004461.2-201ENST00000629517 803 ntBASIC12.06□□□□□ -0.48
SSSCA1O60232 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.06□□□□□ -0.48
SSSCA1O60232 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SSSCA1O60232 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SSSCA1O60232 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SSSCA1O60232 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SSSCA1O60232 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.06□□□□□ -0.48
SSSCA1O60232 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.06□□□□□ -0.48
SSSCA1O60232 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.06□□□□□ -0.48
SSSCA1O60232 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
SSSCA1O60232 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SSSCA1O60232 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SSSCA1O60232 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
SSSCA1O60232 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SSSCA1O60232 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SSSCA1O60232 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SSSCA1O60232 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SSSCA1O60232 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SSSCA1O60232 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SSSCA1O60232 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SSSCA1O60232 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SSSCA1O60232 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SSSCA1O60232 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SSSCA1O60232 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
SSSCA1O60232 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.06□□□□□ -0.48
SSSCA1O60232 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
SSSCA1O60232 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
SSSCA1O60232 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SSSCA1O60232 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.05□□□□□ -0.48
SSSCA1O60232 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SSSCA1O60232 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSSCA1O60232 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
SSSCA1O60232 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.05□□□□□ -0.48
SSSCA1O60232 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
SSSCA1O60232 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSSCA1O60232 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSSCA1O60232 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
SSSCA1O60232 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSSCA1O60232 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
SSSCA1O60232 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSSCA1O60232 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.05□□□□□ -0.48
SSSCA1O60232 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
SSSCA1O60232 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
SSSCA1O60232 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SSSCA1O60232 AGAP10P-201ENST00000454844 2418 ntBASIC12.05□□□□□ -0.48
SSSCA1O60232 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSSCA1O60232 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
SSSCA1O60232 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
SSSCA1O60232 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSSCA1O60232 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.05□□□□□ -0.48
SSSCA1O60232 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSSCA1O60232 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.05□□□□□ -0.48
SSSCA1O60232 AL590627.1-203ENST00000421194 1026 ntBASIC12.05□□□□□ -0.48
SSSCA1O60232 MCCD1P2-201ENST00000423228 335 ntBASIC12.05□□□□□ -0.48
SSSCA1O60232 HTR5BP-201ENST00000430851 1154 ntBASIC12.05□□□□□ -0.48
SSSCA1O60232 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
SSSCA1O60232 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.05□□□□□ -0.48
SSSCA1O60232 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.05□□□□□ -0.48
SSSCA1O60232 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.05□□□□□ -0.48
SSSCA1O60232 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.05□□□□□ -0.48
SSSCA1O60232 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.05□□□□□ -0.48
SSSCA1O60232 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.05□□□□□ -0.48
SSSCA1O60232 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.05□□□□□ -0.48
SSSCA1O60232 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.05□□□□□ -0.48
SSSCA1O60232 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
SSSCA1O60232 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.05□□□□□ -0.48
SSSCA1O60232 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSSCA1O60232 CLK3P2-201ENST00000427566 1453 ntBASIC12.05□□□□□ -0.48
SSSCA1O60232 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSSCA1O60232 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SSSCA1O60232 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms