Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 GK-202ENST00000378941 458 ntTSL 3 BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 AC099336.1-201ENST00000417053 1171 ntBASIC13.11□□□□□ -0.31
TRAF3IP2O43734 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 AC022210.1-201ENST00000449856 793 ntBASIC13.11□□□□□ -0.31
TRAF3IP2O43734 CICP12-201ENST00000455801 843 ntBASIC13.11□□□□□ -0.31
TRAF3IP2O43734 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 AC027601.5-201ENST00000624065 2482 ntBASIC13.11□□□□□ -0.31
TRAF3IP2O43734 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAF3IP2O43734 SHC1P1-201ENST00000425230 1745 ntBASIC13.1□□□□□ -0.31
TRAF3IP2O43734 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 MIR326-201ENST00000362220 95 ntBASIC13.1□□□□□ -0.31
TRAF3IP2O43734 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRAF3IP2O43734 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms