Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.97□□□□□ -0.01
RIPK2O43353 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.97□□□□□ -0.01
RIPK2O43353 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.97□□□□□ -0.01
RIPK2O43353 AC009407.1-201ENST00000568958 598 ntBASIC14.97□□□□□ -0.01
RIPK2O43353 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.97□□□□□ -0.01
RIPK2O43353 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RIPK2O43353 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.97□□□□□ -0.01
RIPK2O43353 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RIPK2O43353 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RIPK2O43353 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
RIPK2O43353 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RIPK2O43353 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC14.97□□□□□ -0.01
RIPK2O43353 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.97□□□□□ -0.01
RIPK2O43353 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RIPK2O43353 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RIPK2O43353 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RIPK2O43353 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.97□□□□□ -0.01
RIPK2O43353 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RIPK2O43353 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RIPK2O43353 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RIPK2O43353 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RIPK2O43353 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
RIPK2O43353 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RIPK2O43353 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RIPK2O43353 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.97□□□□□ -0.01
RIPK2O43353 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RIPK2O43353 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC14.96□□□□□ -0.01
RIPK2O43353 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RIPK2O43353 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.96□□□□□ -0.01
RIPK2O43353 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
RIPK2O43353 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RIPK2O43353 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RIPK2O43353 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RIPK2O43353 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RIPK2O43353 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RIPK2O43353 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RIPK2O43353 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RIPK2O43353 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RIPK2O43353 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
RIPK2O43353 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RIPK2O43353 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RIPK2O43353 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RIPK2O43353 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RIPK2O43353 RN7SKP230-201ENST00000365642 335 ntBASIC14.96□□□□□ -0.01
RIPK2O43353 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RIPK2O43353 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RIPK2O43353 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
RIPK2O43353 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.96□□□□□ -0.01
RIPK2O43353 UPF3AP3-201ENST00000420996 769 ntBASIC14.96□□□□□ -0.01
RIPK2O43353 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.96□□□□□ -0.01
RIPK2O43353 AC107890.1-201ENST00000422478 521 ntBASIC14.96□□□□□ -0.01
RIPK2O43353 AC097493.3-201ENST00000509725 367 ntBASIC14.96□□□□□ -0.01
RIPK2O43353 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.96□□□□□ -0.01
RIPK2O43353 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
RIPK2O43353 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.96□□□□□ -0.01
RIPK2O43353 AC004466.1-201ENST00000599515 1080 ntBASIC14.96□□□□□ -0.01
RIPK2O43353 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RIPK2O43353 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
RIPK2O43353 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
RIPK2O43353 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.96□□□□□ -0.01
RIPK2O43353 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RIPK2O43353 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
RIPK2O43353 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RIPK2O43353 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.96□□□□□ -0.02
RIPK2O43353 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RIPK2O43353 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RIPK2O43353 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
RIPK2O43353 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
RIPK2O43353 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
RIPK2O43353 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
RIPK2O43353 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.96□□□□□ -0.02
RIPK2O43353 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
RIPK2O43353 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RIPK2O43353 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RIPK2O43353 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RIPK2O43353 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.95□□□□□ -0.02
RIPK2O43353 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RIPK2O43353 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RIPK2O43353 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RIPK2O43353 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.95□□□□□ -0.02
RIPK2O43353 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RIPK2O43353 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RIPK2O43353 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RIPK2O43353 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.95□□□□□ -0.02
RIPK2O43353 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RIPK2O43353 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RIPK2O43353 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
RIPK2O43353 KLF2P2-201ENST00000416807 1039 ntBASIC14.95□□□□□ -0.02
RIPK2O43353 TSSK5P-201ENST00000423978 907 ntBASIC14.95□□□□□ -0.02
RIPK2O43353 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RIPK2O43353 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.95□□□□□ -0.02
RIPK2O43353 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RIPK2O43353 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.95□□□□□ -0.02
RIPK2O43353 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.95□□□□□ -0.02
RIPK2O43353 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
RIPK2O43353 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.95□□□□□ -0.02
RIPK2O43353 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.95□□□□□ -0.02
RIPK2O43353 BRI3BPP1-201ENST00000594224 787 ntBASIC14.95□□□□□ -0.02
RIPK2O43353 AL158211.3-201ENST00000607385 239 ntBASIC14.95□□□□□ -0.02
RIPK2O43353 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms