Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 INO80-211ENST00000616814 4272 ntTSL 5 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 ANKDD1A-201ENST00000319580 3110 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 CLVS2-201ENST00000275162 11485 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 GAS7-202ENST00000396115 929 ntTSL 5 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 HMGN1P19-201ENST00000436976 333 ntBASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 TSPY6P-201ENST00000448518 926 ntBASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 AC026366.1-201ENST00000488803 879 ntBASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 AC142086.2-201ENST00000569753 217 ntBASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 AL365330.1-201ENST00000607459 531 ntBASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 CPT1A-201ENST00000265641 5232 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 SNRNP200-201ENST00000323853 7165 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 TUSC5-201ENST00000333813 3596 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 ZHX1-206ENST00000522655 3357 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 KIAA0895-202ENST00000317020 4241 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 IDO2-204ENST00000502986 2294 ntTSL 5 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 ARID1B-230ENST00000637810 5073 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 NEK1-206ENST00000510533 5377 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 ELN-205ENST00000358929 3967 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC8.09□□□□□ -1.11
CHKB-CPT1BH3BT56 HERC2P9-203ENST00000528584 2947 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
CHKB-CPT1BH3BT56 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
CHKB-CPT1BH3BT56 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.12
CHKB-CPT1BH3BT56 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
CHKB-CPT1BH3BT56 RD3-201ENST00000367002 4266 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
CHKB-CPT1BH3BT56 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
CHKB-CPT1BH3BT56 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC8.09□□□□□ -1.12
CHKB-CPT1BH3BT56 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC8.09□□□□□ -1.12
CHKB-CPT1BH3BT56 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
CHKB-CPT1BH3BT56 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
CHKB-CPT1BH3BT56 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
CHKB-CPT1BH3BT56 WASL-201ENST00000223023 4435 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
CHKB-CPT1BH3BT56 DAB1-205ENST00000371236 5298 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.12
CHKB-CPT1BH3BT56 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 YOD1-201ENST00000315927 6265 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 PLAC4-201ENST00000623119 5588 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 IKZF4-203ENST00000547167 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 ZMYND8-202ENST00000311275 5362 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 MAX-212ENST00000555932 1673 ntTSL 5 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 HLA-V-203ENST00000457107 4814 ntBASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 FERMT2-201ENST00000341590 3338 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 LAMB1-203ENST00000393560 2806 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 AC215219.1-201ENST00000400706 1817 ntBASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHKB-CPT1BH3BT56 AC005696.4-201ENST00000614400 3147 ntBASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms