Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPB4C9JG80 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPB4C9JG80 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPB4C9JG80 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPB4C9JG80 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.97□□□□□ -0.33
NPIPB4C9JG80 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC12.97□□□□□ -0.33
NPIPB4C9JG80 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.97□□□□□ -0.33
NPIPB4C9JG80 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC12.97□□□□□ -0.33
NPIPB4C9JG80 AC244157.2-201ENST00000616239 1006 ntBASIC12.97□□□□□ -0.33
NPIPB4C9JG80 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPB4C9JG80 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPB4C9JG80 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.97□□□□□ -0.33
NPIPB4C9JG80 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NPIPB4C9JG80 LINC01230-201ENST00000625222 3017 ntBASIC12.97□□□□□ -0.33
NPIPB4C9JG80 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPB4C9JG80 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPB4C9JG80 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPB4C9JG80 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPB4C9JG80 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.97□□□□□ -0.33
NPIPB4C9JG80 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.97□□□□□ -0.33
NPIPB4C9JG80 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.97□□□□□ -0.33
NPIPB4C9JG80 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
NPIPB4C9JG80 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPB4C9JG80 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPB4C9JG80 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPB4C9JG80 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPB4C9JG80 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPB4C9JG80 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 AC026954.1-201ENST00000429771 1293 ntBASIC12.96□□□□□ -0.33
NPIPB4C9JG80 ST13P19-201ENST00000442505 1124 ntBASIC12.96□□□□□ -0.33
NPIPB4C9JG80 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 CROCCP4-201ENST00000457096 498 ntBASIC12.96□□□□□ -0.33
NPIPB4C9JG80 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 KRT17P8-201ENST00000540749 863 ntBASIC12.96□□□□□ -0.33
NPIPB4C9JG80 AP006547.1-201ENST00000563435 692 ntBASIC12.96□□□□□ -0.33
NPIPB4C9JG80 DUX4L45-201ENST00000566406 1057 ntBASIC12.96□□□□□ -0.33
NPIPB4C9JG80 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 TMBIM7P-202ENST00000641474 1516 ntBASIC12.96□□□□□ -0.33
NPIPB4C9JG80 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPB4C9JG80 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
NPIPB4C9JG80 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NPIPB4C9JG80 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NPIPB4C9JG80 AL023775.1-201ENST00000454907 1746 ntBASIC12.96□□□□□ -0.34
NPIPB4C9JG80 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NPIPB4C9JG80 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.96□□□□□ -0.34
NPIPB4C9JG80 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NPIPB4C9JG80 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NPIPB4C9JG80 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NPIPB4C9JG80 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
NPIPB4C9JG80 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.96□□□□□ -0.34
NPIPB4C9JG80 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 AL008718.2-201ENST00000609206 1313 ntBASIC12.95□□□□□ -0.34
NPIPB4C9JG80 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPB4C9JG80 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms