Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 UPF3AP2-201ENST00000457924 1132 ntBASIC15.32■□□□□ 0.04
SRRM3A6NNA2 AC098859.1-201ENST00000502915 1238 ntBASIC15.32■□□□□ 0.04
SRRM3A6NNA2 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 AP000812.2-201ENST00000538934 718 ntBASIC15.32■□□□□ 0.04
SRRM3A6NNA2 ACTG1P17-201ENST00000558391 1119 ntBASIC15.32■□□□□ 0.04
SRRM3A6NNA2 MIR5189-201ENST00000577370 114 ntBASIC15.32■□□□□ 0.04
SRRM3A6NNA2 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM3A6NNA2 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 ACTG1P3-201ENST00000431775 1114 ntBASIC15.31■□□□□ 0.04
SRRM3A6NNA2 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 TDH-203ENST00000531764 1110 ntBASIC15.31■□□□□ 0.04
SRRM3A6NNA2 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 MIR7845-201ENST00000618396 99 ntBASIC15.31■□□□□ 0.04
SRRM3A6NNA2 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 AL136982.4-201ENST00000437689 1740 ntBASIC15.31■□□□□ 0.04
SRRM3A6NNA2 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM3A6NNA2 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM3A6NNA2 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms