Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 AL157813.1-201ENST00000612996 587 ntBASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 AC092299.1-201ENST00000632679 757 ntBASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.62□□□□□ -0.07
TBC1D3FA6NER0 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 FTLP1-201ENST00000449155 526 ntBASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 AC116345.2-201ENST00000512837 523 ntBASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TBC1D3FA6NER0 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TBC1D3FA6NER0 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TBC1D3FA6NER0 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.6□□□□□ -0.07
TBC1D3FA6NER0 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.6□□□□□ -0.07
TBC1D3FA6NER0 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TBC1D3FA6NER0 AC144831.1-201ENST00000573312 2656 ntBASIC14.6□□□□□ -0.07
TBC1D3FA6NER0 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TBC1D3FA6NER0 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TBC1D3FA6NER0 AC009093.10-201ENST00000641956 1442 ntBASIC14.6□□□□□ -0.07
TBC1D3FA6NER0 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TBC1D3FA6NER0 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TBC1D3FA6NER0 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TBC1D3FA6NER0 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
TBC1D3FA6NER0 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TBC1D3FA6NER0 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TBC1D3FA6NER0 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms