Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PTCH2Q9Y6C5 ME3-201ENST00000323418 1068 ntTSL 5 BASIC26.07■■□□□ 1.76
PTCH2Q9Y6C5 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.07■■□□□ 1.76
PTCH2Q9Y6C5 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC26.07■■□□□ 1.76
PTCH2Q9Y6C5 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
PTCH2Q9Y6C5 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
PTCH2Q9Y6C5 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PTCH2Q9Y6C5 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PTCH2Q9Y6C5 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PTCH2Q9Y6C5 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
PTCH2Q9Y6C5 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
PTCH2Q9Y6C5 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC26.06■■□□□ 1.76
PTCH2Q9Y6C5 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC26.06■■□□□ 1.76
PTCH2Q9Y6C5 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PTCH2Q9Y6C5 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PTCH2Q9Y6C5 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PTCH2Q9Y6C5 AC097639.1-201ENST00000565519 1891 ntBASIC26.05■■□□□ 1.76
PTCH2Q9Y6C5 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PTCH2Q9Y6C5 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
PTCH2Q9Y6C5 TK2-208ENST00000545043 1120 ntTSL 2 BASIC26.05■■□□□ 1.76
PTCH2Q9Y6C5 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
PTCH2Q9Y6C5 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
PTCH2Q9Y6C5 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PTCH2Q9Y6C5 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PTCH2Q9Y6C5 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC26.04■■□□□ 1.76
PTCH2Q9Y6C5 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
PTCH2Q9Y6C5 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PTCH2Q9Y6C5 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC26.04■■□□□ 1.76
PTCH2Q9Y6C5 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PTCH2Q9Y6C5 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
PTCH2Q9Y6C5 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PTCH2Q9Y6C5 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
PTCH2Q9Y6C5 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PTCH2Q9Y6C5 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
PTCH2Q9Y6C5 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
PTCH2Q9Y6C5 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.03■■□□□ 1.76
PTCH2Q9Y6C5 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
PTCH2Q9Y6C5 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
PTCH2Q9Y6C5 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC26.02■■□□□ 1.76
PTCH2Q9Y6C5 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PTCH2Q9Y6C5 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PTCH2Q9Y6C5 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC26.02■■□□□ 1.76
PTCH2Q9Y6C5 ABHD17AP1-201ENST00000358206 933 ntBASIC26.02■■□□□ 1.76
PTCH2Q9Y6C5 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC26.02■■□□□ 1.76
PTCH2Q9Y6C5 AC012414.1-201ENST00000556676 535 ntBASIC26.02■■□□□ 1.76
PTCH2Q9Y6C5 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC26.01■■□□□ 1.75
PTCH2Q9Y6C5 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PTCH2Q9Y6C5 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC26.01■■□□□ 1.75
PTCH2Q9Y6C5 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.01■■□□□ 1.75
PTCH2Q9Y6C5 KRT18P14-201ENST00000534205 1250 ntBASIC26.01■■□□□ 1.75
PTCH2Q9Y6C5 AICDA-202ENST00000537228 667 ntTSL 5 BASIC26.01■■□□□ 1.75
PTCH2Q9Y6C5 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
PTCH2Q9Y6C5 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
PTCH2Q9Y6C5 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
PTCH2Q9Y6C5 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
PTCH2Q9Y6C5 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
PTCH2Q9Y6C5 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PTCH2Q9Y6C5 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.99■■□□□ 1.75
PTCH2Q9Y6C5 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PTCH2Q9Y6C5 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PTCH2Q9Y6C5 AC096887.2-201ENST00000623443 1957 ntBASIC25.98■■□□□ 1.75
PTCH2Q9Y6C5 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.98■■□□□ 1.75
PTCH2Q9Y6C5 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC25.98■■□□□ 1.75
PTCH2Q9Y6C5 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PTCH2Q9Y6C5 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
PTCH2Q9Y6C5 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PTCH2Q9Y6C5 MIR572-201ENST00000384983 95 ntBASIC25.98■■□□□ 1.75
PTCH2Q9Y6C5 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC25.98■■□□□ 1.75
PTCH2Q9Y6C5 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC25.98■■□□□ 1.75
PTCH2Q9Y6C5 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC25.98■■□□□ 1.75
PTCH2Q9Y6C5 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
PTCH2Q9Y6C5 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
PTCH2Q9Y6C5 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PTCH2Q9Y6C5 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC25.97■■□□□ 1.75
PTCH2Q9Y6C5 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC25.97■■□□□ 1.75
PTCH2Q9Y6C5 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC25.97■■□□□ 1.75
PTCH2Q9Y6C5 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC25.97■■□□□ 1.75
PTCH2Q9Y6C5 pRNA.6-201ENST00000610482 90 ntBASIC25.97■■□□□ 1.75
PTCH2Q9Y6C5 pRNA.5-201ENST00000612139 90 ntBASIC25.97■■□□□ 1.75
PTCH2Q9Y6C5 GXYLT1P5-201ENST00000614548 1189 ntBASIC25.97■■□□□ 1.75
PTCH2Q9Y6C5 pRNA.11-201ENST00000618423 90 ntBASIC25.97■■□□□ 1.75
PTCH2Q9Y6C5 pRNA.13-201ENST00000619112 90 ntBASIC25.97■■□□□ 1.75
PTCH2Q9Y6C5 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC25.97■■□□□ 1.75
PTCH2Q9Y6C5 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
PTCH2Q9Y6C5 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PTCH2Q9Y6C5 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.97■■□□□ 1.75
PTCH2Q9Y6C5 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC25.97■■□□□ 1.75
PTCH2Q9Y6C5 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PTCH2Q9Y6C5 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
PTCH2Q9Y6C5 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
PTCH2Q9Y6C5 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PTCH2Q9Y6C5 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PTCH2Q9Y6C5 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
PTCH2Q9Y6C5 TERF1P2-201ENST00000583350 1212 ntBASIC25.96■■□□□ 1.75
PTCH2Q9Y6C5 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
PTCH2Q9Y6C5 AL354811.1-201ENST00000610286 706 ntBASIC25.96■■□□□ 1.75
PTCH2Q9Y6C5 AC080038.1-201ENST00000611274 1154 ntBASIC25.96■■□□□ 1.75
PTCH2Q9Y6C5 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PTCH2Q9Y6C5 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PTCH2Q9Y6C5 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms