Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HRH3Q9Y5N1 AL136116.3-201ENST00000402907 1138 ntBASIC20.99■□□□□ 0.95
HRH3Q9Y5N1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HRH3Q9Y5N1 MIR4466-201ENST00000606121 54 ntBASIC20.99■□□□□ 0.95
HRH3Q9Y5N1 LINC01124-201ENST00000409786 2117 ntBASIC20.99■□□□□ 0.95
HRH3Q9Y5N1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HRH3Q9Y5N1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
HRH3Q9Y5N1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
HRH3Q9Y5N1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HRH3Q9Y5N1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
HRH3Q9Y5N1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.98■□□□□ 0.95
HRH3Q9Y5N1 AC004448.1-201ENST00000458332 883 ntBASIC20.98■□□□□ 0.95
HRH3Q9Y5N1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HRH3Q9Y5N1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HRH3Q9Y5N1 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HRH3Q9Y5N1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HRH3Q9Y5N1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HRH3Q9Y5N1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.97■□□□□ 0.95
HRH3Q9Y5N1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HRH3Q9Y5N1 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HRH3Q9Y5N1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HRH3Q9Y5N1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HRH3Q9Y5N1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HRH3Q9Y5N1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.97■□□□□ 0.95
HRH3Q9Y5N1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.97■□□□□ 0.95
HRH3Q9Y5N1 AL139246.5-201ENST00000606645 996 ntBASIC20.97■□□□□ 0.95
HRH3Q9Y5N1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.97■□□□□ 0.95
HRH3Q9Y5N1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
HRH3Q9Y5N1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HRH3Q9Y5N1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HRH3Q9Y5N1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HRH3Q9Y5N1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
HRH3Q9Y5N1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.96■□□□□ 0.95
HRH3Q9Y5N1 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
HRH3Q9Y5N1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.96■□□□□ 0.95
HRH3Q9Y5N1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.96■□□□□ 0.95
HRH3Q9Y5N1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HRH3Q9Y5N1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.95
HRH3Q9Y5N1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HRH3Q9Y5N1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HRH3Q9Y5N1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
HRH3Q9Y5N1 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HRH3Q9Y5N1 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
HRH3Q9Y5N1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HRH3Q9Y5N1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.95■□□□□ 0.94
HRH3Q9Y5N1 MIR935-201ENST00000401179 91 ntBASIC20.95■□□□□ 0.94
HRH3Q9Y5N1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.95■□□□□ 0.94
HRH3Q9Y5N1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HRH3Q9Y5N1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.95■□□□□ 0.94
HRH3Q9Y5N1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HRH3Q9Y5N1 AL356740.2-201ENST00000601559 647 ntBASIC20.95■□□□□ 0.94
HRH3Q9Y5N1 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.95■□□□□ 0.94
HRH3Q9Y5N1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
HRH3Q9Y5N1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HRH3Q9Y5N1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HRH3Q9Y5N1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
HRH3Q9Y5N1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HRH3Q9Y5N1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HRH3Q9Y5N1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
HRH3Q9Y5N1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HRH3Q9Y5N1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HRH3Q9Y5N1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.94■□□□□ 0.94
HRH3Q9Y5N1 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.94■□□□□ 0.94
HRH3Q9Y5N1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.94■□□□□ 0.94
HRH3Q9Y5N1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.94■□□□□ 0.94
HRH3Q9Y5N1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HRH3Q9Y5N1 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.94■□□□□ 0.94
HRH3Q9Y5N1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HRH3Q9Y5N1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
HRH3Q9Y5N1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HRH3Q9Y5N1 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
HRH3Q9Y5N1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HRH3Q9Y5N1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HRH3Q9Y5N1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HRH3Q9Y5N1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.93■□□□□ 0.94
HRH3Q9Y5N1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.93■□□□□ 0.94
HRH3Q9Y5N1 AL512631.2-201ENST00000604634 923 ntBASIC20.93■□□□□ 0.94
HRH3Q9Y5N1 AC110285.6-201ENST00000617652 491 ntBASIC20.93■□□□□ 0.94
HRH3Q9Y5N1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HRH3Q9Y5N1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.93■□□□□ 0.94
HRH3Q9Y5N1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HRH3Q9Y5N1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
HRH3Q9Y5N1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.92■□□□□ 0.94
HRH3Q9Y5N1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HRH3Q9Y5N1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
HRH3Q9Y5N1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.92■□□□□ 0.94
HRH3Q9Y5N1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HRH3Q9Y5N1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HRH3Q9Y5N1 AL022069.1-201ENST00000568025 1636 ntBASIC20.92■□□□□ 0.94
HRH3Q9Y5N1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HRH3Q9Y5N1 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HRH3Q9Y5N1 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HRH3Q9Y5N1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HRH3Q9Y5N1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HRH3Q9Y5N1 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HRH3Q9Y5N1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.91■□□□□ 0.94
HRH3Q9Y5N1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HRH3Q9Y5N1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.91■□□□□ 0.94
HRH3Q9Y5N1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.91■□□□□ 0.94
HRH3Q9Y5N1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms