Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHA11Q9Y5I1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
PCDHA11Q9Y5I1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHA11Q9Y5I1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHA11Q9Y5I1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.88■■□□□ 1.57
PCDHA11Q9Y5I1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC24.88■■□□□ 1.57
PCDHA11Q9Y5I1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHA11Q9Y5I1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHA11Q9Y5I1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHA11Q9Y5I1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHA11Q9Y5I1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.87■■□□□ 1.57
PCDHA11Q9Y5I1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHA11Q9Y5I1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHA11Q9Y5I1 BX842568.3-201ENST00000418104 571 ntBASIC24.87■■□□□ 1.57
PCDHA11Q9Y5I1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHA11Q9Y5I1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHA11Q9Y5I1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC24.87■■□□□ 1.57
PCDHA11Q9Y5I1 AC092437.1-201ENST00000624794 1048 ntBASIC24.87■■□□□ 1.57
PCDHA11Q9Y5I1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
PCDHA11Q9Y5I1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHA11Q9Y5I1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.87■■□□□ 1.57
PCDHA11Q9Y5I1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
PCDHA11Q9Y5I1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHA11Q9Y5I1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.86■■□□□ 1.57
PCDHA11Q9Y5I1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHA11Q9Y5I1 GRAMD4P2-201ENST00000423297 1097 ntBASIC24.86■■□□□ 1.57
PCDHA11Q9Y5I1 YBX1P1-201ENST00000445822 960 ntBASIC24.86■■□□□ 1.57
PCDHA11Q9Y5I1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC24.86■■□□□ 1.57
PCDHA11Q9Y5I1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHA11Q9Y5I1 AC241377.3-202ENST00000626088 1088 ntBASIC24.86■■□□□ 1.57
PCDHA11Q9Y5I1 AC241585.3-202ENST00000628937 1088 ntBASIC24.86■■□□□ 1.57
PCDHA11Q9Y5I1 AC245100.8-202ENST00000629247 1058 ntBASIC24.86■■□□□ 1.57
PCDHA11Q9Y5I1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC24.86■■□□□ 1.57
PCDHA11Q9Y5I1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHA11Q9Y5I1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC24.86■■□□□ 1.57
PCDHA11Q9Y5I1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDHA11Q9Y5I1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHA11Q9Y5I1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHA11Q9Y5I1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.85■■□□□ 1.57
PCDHA11Q9Y5I1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC24.85■■□□□ 1.57
PCDHA11Q9Y5I1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.85■■□□□ 1.57
PCDHA11Q9Y5I1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC24.85■■□□□ 1.57
PCDHA11Q9Y5I1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHA11Q9Y5I1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24.85■■□□□ 1.57
PCDHA11Q9Y5I1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.85■■□□□ 1.57
PCDHA11Q9Y5I1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.85■■□□□ 1.57
PCDHA11Q9Y5I1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
PCDHA11Q9Y5I1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDHA11Q9Y5I1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.85■■□□□ 1.57
PCDHA11Q9Y5I1 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHA11Q9Y5I1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHA11Q9Y5I1 AC009102.2-201ENST00000606772 1639 ntBASIC24.84■■□□□ 1.57
PCDHA11Q9Y5I1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.84■■□□□ 1.57
PCDHA11Q9Y5I1 ID1-201ENST00000376105 1233 ntBASIC24.84■■□□□ 1.57
PCDHA11Q9Y5I1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.84■■□□□ 1.57
PCDHA11Q9Y5I1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC24.84■■□□□ 1.57
PCDHA11Q9Y5I1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHA11Q9Y5I1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.84■■□□□ 1.57
PCDHA11Q9Y5I1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
PCDHA11Q9Y5I1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHA11Q9Y5I1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHA11Q9Y5I1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHA11Q9Y5I1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.83■■□□□ 1.57
PCDHA11Q9Y5I1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHA11Q9Y5I1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHA11Q9Y5I1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHA11Q9Y5I1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.83■■□□□ 1.57
PCDHA11Q9Y5I1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.83■■□□□ 1.57
PCDHA11Q9Y5I1 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHA11Q9Y5I1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.82■■□□□ 1.56
PCDHA11Q9Y5I1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHA11Q9Y5I1 AC135731.1-201ENST00000569415 2548 ntBASIC24.82■■□□□ 1.56
PCDHA11Q9Y5I1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHA11Q9Y5I1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.82■■□□□ 1.56
PCDHA11Q9Y5I1 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHA11Q9Y5I1 AC020928.2-201ENST00000588717 2197 ntBASIC24.81■■□□□ 1.56
PCDHA11Q9Y5I1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHA11Q9Y5I1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHA11Q9Y5I1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHA11Q9Y5I1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.81■■□□□ 1.56
PCDHA11Q9Y5I1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC24.81■■□□□ 1.56
PCDHA11Q9Y5I1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC24.81■■□□□ 1.56
PCDHA11Q9Y5I1 AL031602.1-201ENST00000633169 911 ntBASIC24.81■■□□□ 1.56
PCDHA11Q9Y5I1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHA11Q9Y5I1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
PCDHA11Q9Y5I1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHA11Q9Y5I1 AC097639.1-201ENST00000565519 1891 ntBASIC24.81■■□□□ 1.56
PCDHA11Q9Y5I1 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHA11Q9Y5I1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
PCDHA11Q9Y5I1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHA11Q9Y5I1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHA11Q9Y5I1 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHA11Q9Y5I1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHA11Q9Y5I1 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
PCDHA11Q9Y5I1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHA11Q9Y5I1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
PCDHA11Q9Y5I1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.79■■□□□ 1.56
PCDHA11Q9Y5I1 DUX4L2-201ENST00000561772 1275 ntBASIC24.79■■□□□ 1.56
PCDHA11Q9Y5I1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.79■■□□□ 1.56
PCDHA11Q9Y5I1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.79■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms