Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA9Q9Y5G4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.28■■□□□ 1
PCDHGA9Q9Y5G4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.28■■□□□ 1
PCDHGA9Q9Y5G4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGA9Q9Y5G4 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGA9Q9Y5G4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGA9Q9Y5G4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHGA9Q9Y5G4 AP001330.3-201ENST00000520123 633 ntBASIC21.27■■□□□ 1
PCDHGA9Q9Y5G4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.27■■□□□ 1
PCDHGA9Q9Y5G4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHGA9Q9Y5G4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA9Q9Y5G4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA9Q9Y5G4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA9Q9Y5G4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PCDHGA9Q9Y5G4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PCDHGA9Q9Y5G4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA9Q9Y5G4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA9Q9Y5G4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.26■□□□□ 0.99
PCDHGA9Q9Y5G4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA9Q9Y5G4 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA9Q9Y5G4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA9Q9Y5G4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA9Q9Y5G4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PCDHGA9Q9Y5G4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGA9Q9Y5G4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.26■□□□□ 0.99
PCDHGA9Q9Y5G4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA9Q9Y5G4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
PCDHGA9Q9Y5G4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA9Q9Y5G4 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDHGA9Q9Y5G4 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDHGA9Q9Y5G4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA9Q9Y5G4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA9Q9Y5G4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDHGA9Q9Y5G4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA9Q9Y5G4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PCDHGA9Q9Y5G4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDHGA9Q9Y5G4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHGA9Q9Y5G4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHGA9Q9Y5G4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA9Q9Y5G4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA9Q9Y5G4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGA9Q9Y5G4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA9Q9Y5G4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA9Q9Y5G4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHGA9Q9Y5G4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
PCDHGA9Q9Y5G4 AC010501.1-201ENST00000606270 1962 ntBASIC21.24■□□□□ 0.99
PCDHGA9Q9Y5G4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA9Q9Y5G4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA9Q9Y5G4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA9Q9Y5G4 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGA9Q9Y5G4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA9Q9Y5G4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA9Q9Y5G4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA9Q9Y5G4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDHGA9Q9Y5G4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PCDHGA9Q9Y5G4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA9Q9Y5G4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA9Q9Y5G4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA9Q9Y5G4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
PCDHGA9Q9Y5G4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA9Q9Y5G4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDHGA9Q9Y5G4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDHGA9Q9Y5G4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGA9Q9Y5G4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDHGA9Q9Y5G4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDHGA9Q9Y5G4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA9Q9Y5G4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA9Q9Y5G4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA9Q9Y5G4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA9Q9Y5G4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PCDHGA9Q9Y5G4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA9Q9Y5G4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.22■□□□□ 0.99
PCDHGA9Q9Y5G4 MIR4767-201ENST00000582827 78 ntBASIC21.22■□□□□ 0.99
PCDHGA9Q9Y5G4 MIR6821-201ENST00000617625 74 ntBASIC21.22■□□□□ 0.99
PCDHGA9Q9Y5G4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGA9Q9Y5G4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGA9Q9Y5G4 AC142381.3-201ENST00000568208 1670 ntBASIC21.21■□□□□ 0.99
PCDHGA9Q9Y5G4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGA9Q9Y5G4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGA9Q9Y5G4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PCDHGA9Q9Y5G4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.21■□□□□ 0.99
PCDHGA9Q9Y5G4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHGA9Q9Y5G4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHGA9Q9Y5G4 AL138724.1-201ENST00000606771 1088 ntBASIC21.21■□□□□ 0.99
PCDHGA9Q9Y5G4 RASA4CP-201ENST00000424092 1398 ntBASIC21.21■□□□□ 0.99
PCDHGA9Q9Y5G4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
PCDHGA9Q9Y5G4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PCDHGA9Q9Y5G4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
PCDHGA9Q9Y5G4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGA9Q9Y5G4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHGA9Q9Y5G4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGA9Q9Y5G4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PCDHGA9Q9Y5G4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
PCDHGA9Q9Y5G4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.19■□□□□ 0.98
PCDHGA9Q9Y5G4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.19■□□□□ 0.98
PCDHGA9Q9Y5G4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PCDHGA9Q9Y5G4 AC011298.3-201ENST00000615796 283 ntBASIC21.19■□□□□ 0.98
PCDHGA9Q9Y5G4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.19■□□□□ 0.98
PCDHGA9Q9Y5G4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PCDHGA9Q9Y5G4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms