Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
KDM3AQ9Y4C1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.72■■□□□ 1.71
KDM3AQ9Y4C1 SNX5-217ENST00000606557 1087 ntBASIC25.72■■□□□ 1.71
KDM3AQ9Y4C1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
KDM3AQ9Y4C1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.72■■□□□ 1.71
KDM3AQ9Y4C1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
KDM3AQ9Y4C1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
KDM3AQ9Y4C1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
KDM3AQ9Y4C1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.71■■□□□ 1.71
KDM3AQ9Y4C1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC25.71■■□□□ 1.71
KDM3AQ9Y4C1 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.71■■□□□ 1.71
KDM3AQ9Y4C1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
KDM3AQ9Y4C1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.7■■□□□ 1.71
KDM3AQ9Y4C1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
KDM3AQ9Y4C1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.71
KDM3AQ9Y4C1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.7■■□□□ 1.71
KDM3AQ9Y4C1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.7■■□□□ 1.71
KDM3AQ9Y4C1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
KDM3AQ9Y4C1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.7■■□□□ 1.7
KDM3AQ9Y4C1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
KDM3AQ9Y4C1 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.69■■□□□ 1.7
KDM3AQ9Y4C1 AL136116.3-201ENST00000402907 1138 ntBASIC25.69■■□□□ 1.7
KDM3AQ9Y4C1 MIR6722-201ENST00000617286 78 ntBASIC25.69■■□□□ 1.7
KDM3AQ9Y4C1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
KDM3AQ9Y4C1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
KDM3AQ9Y4C1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC25.69■■□□□ 1.7
KDM3AQ9Y4C1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
KDM3AQ9Y4C1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
KDM3AQ9Y4C1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
KDM3AQ9Y4C1 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
KDM3AQ9Y4C1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.68■■□□□ 1.7
KDM3AQ9Y4C1 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
KDM3AQ9Y4C1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.68■■□□□ 1.7
KDM3AQ9Y4C1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
KDM3AQ9Y4C1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
KDM3AQ9Y4C1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
KDM3AQ9Y4C1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
KDM3AQ9Y4C1 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
KDM3AQ9Y4C1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
KDM3AQ9Y4C1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
KDM3AQ9Y4C1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
KDM3AQ9Y4C1 AL512631.2-201ENST00000604634 923 ntBASIC25.67■■□□□ 1.7
KDM3AQ9Y4C1 AL139246.5-201ENST00000606645 996 ntBASIC25.67■■□□□ 1.7
KDM3AQ9Y4C1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
KDM3AQ9Y4C1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
KDM3AQ9Y4C1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
KDM3AQ9Y4C1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.67■■□□□ 1.7
KDM3AQ9Y4C1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
KDM3AQ9Y4C1 ABCB10P4-201ENST00000566803 2184 ntBASIC25.67■■□□□ 1.7
KDM3AQ9Y4C1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
KDM3AQ9Y4C1 MIR638-201ENST00000385237 100 ntBASIC25.66■■□□□ 1.7
KDM3AQ9Y4C1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.66■■□□□ 1.7
KDM3AQ9Y4C1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
KDM3AQ9Y4C1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.66■■□□□ 1.7
KDM3AQ9Y4C1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.66■■□□□ 1.7
KDM3AQ9Y4C1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC25.66■■□□□ 1.7
KDM3AQ9Y4C1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
KDM3AQ9Y4C1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
KDM3AQ9Y4C1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
KDM3AQ9Y4C1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC25.66■■□□□ 1.7
KDM3AQ9Y4C1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC25.66■■□□□ 1.7
KDM3AQ9Y4C1 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
KDM3AQ9Y4C1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
KDM3AQ9Y4C1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
KDM3AQ9Y4C1 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
KDM3AQ9Y4C1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
KDM3AQ9Y4C1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.65■■□□□ 1.7
KDM3AQ9Y4C1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC25.65■■□□□ 1.7
KDM3AQ9Y4C1 MIR4466-201ENST00000606121 54 ntBASIC25.65■■□□□ 1.7
KDM3AQ9Y4C1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
KDM3AQ9Y4C1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
KDM3AQ9Y4C1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
KDM3AQ9Y4C1 ALDH1A3-203ENST00000557963 1670 ntBASIC25.65■■□□□ 1.7
KDM3AQ9Y4C1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
KDM3AQ9Y4C1 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
KDM3AQ9Y4C1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
KDM3AQ9Y4C1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.65■■□□□ 1.7
KDM3AQ9Y4C1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
KDM3AQ9Y4C1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
KDM3AQ9Y4C1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.64■■□□□ 1.7
KDM3AQ9Y4C1 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.64■■□□□ 1.7
KDM3AQ9Y4C1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.64■■□□□ 1.7
KDM3AQ9Y4C1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.64■■□□□ 1.7
KDM3AQ9Y4C1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
KDM3AQ9Y4C1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
KDM3AQ9Y4C1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
KDM3AQ9Y4C1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
KDM3AQ9Y4C1 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
KDM3AQ9Y4C1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC25.64■■□□□ 1.69
KDM3AQ9Y4C1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
KDM3AQ9Y4C1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.63■■□□□ 1.69
KDM3AQ9Y4C1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC25.63■■□□□ 1.69
KDM3AQ9Y4C1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
KDM3AQ9Y4C1 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
KDM3AQ9Y4C1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
KDM3AQ9Y4C1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
KDM3AQ9Y4C1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
KDM3AQ9Y4C1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
KDM3AQ9Y4C1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC25.63■■□□□ 1.69
KDM3AQ9Y4C1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms