Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
EXOSC1Q9Y3B2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
EXOSC1Q9Y3B2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EXOSC1Q9Y3B2 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.37■□□□□ 0.85
EXOSC1Q9Y3B2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EXOSC1Q9Y3B2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
EXOSC1Q9Y3B2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.37■□□□□ 0.85
EXOSC1Q9Y3B2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
EXOSC1Q9Y3B2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
EXOSC1Q9Y3B2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
EXOSC1Q9Y3B2 AC137767.1-201ENST00000602918 1920 ntBASIC20.36■□□□□ 0.85
EXOSC1Q9Y3B2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
EXOSC1Q9Y3B2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.36■□□□□ 0.85
EXOSC1Q9Y3B2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
EXOSC1Q9Y3B2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
EXOSC1Q9Y3B2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
EXOSC1Q9Y3B2 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
EXOSC1Q9Y3B2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
EXOSC1Q9Y3B2 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
EXOSC1Q9Y3B2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EXOSC1Q9Y3B2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
EXOSC1Q9Y3B2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EXOSC1Q9Y3B2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EXOSC1Q9Y3B2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EXOSC1Q9Y3B2 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EXOSC1Q9Y3B2 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.35■□□□□ 0.85
EXOSC1Q9Y3B2 RAP2CP1-202ENST00000605179 643 ntBASIC20.35■□□□□ 0.85
EXOSC1Q9Y3B2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
EXOSC1Q9Y3B2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
EXOSC1Q9Y3B2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
EXOSC1Q9Y3B2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.35■□□□□ 0.85
EXOSC1Q9Y3B2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.35■□□□□ 0.85
EXOSC1Q9Y3B2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
EXOSC1Q9Y3B2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EXOSC1Q9Y3B2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.34■□□□□ 0.85
EXOSC1Q9Y3B2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.34■□□□□ 0.85
EXOSC1Q9Y3B2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.34■□□□□ 0.85
EXOSC1Q9Y3B2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EXOSC1Q9Y3B2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
EXOSC1Q9Y3B2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
EXOSC1Q9Y3B2 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
EXOSC1Q9Y3B2 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
EXOSC1Q9Y3B2 AC007029.1-201ENST00000604183 313 ntBASIC20.34■□□□□ 0.85
EXOSC1Q9Y3B2 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EXOSC1Q9Y3B2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
EXOSC1Q9Y3B2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EXOSC1Q9Y3B2 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
EXOSC1Q9Y3B2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
EXOSC1Q9Y3B2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
EXOSC1Q9Y3B2 AC090877.2-201ENST00000558441 1738 ntBASIC20.33■□□□□ 0.85
EXOSC1Q9Y3B2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.33■□□□□ 0.85
EXOSC1Q9Y3B2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
EXOSC1Q9Y3B2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.33■□□□□ 0.85
EXOSC1Q9Y3B2 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
EXOSC1Q9Y3B2 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
EXOSC1Q9Y3B2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
EXOSC1Q9Y3B2 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
EXOSC1Q9Y3B2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.33■□□□□ 0.84
EXOSC1Q9Y3B2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
EXOSC1Q9Y3B2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
EXOSC1Q9Y3B2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.33■□□□□ 0.84
EXOSC1Q9Y3B2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.33■□□□□ 0.84
EXOSC1Q9Y3B2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
EXOSC1Q9Y3B2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
EXOSC1Q9Y3B2 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.33■□□□□ 0.84
EXOSC1Q9Y3B2 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EXOSC1Q9Y3B2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EXOSC1Q9Y3B2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
EXOSC1Q9Y3B2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
EXOSC1Q9Y3B2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
EXOSC1Q9Y3B2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.32■□□□□ 0.84
EXOSC1Q9Y3B2 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EXOSC1Q9Y3B2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.32■□□□□ 0.84
EXOSC1Q9Y3B2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
EXOSC1Q9Y3B2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.32■□□□□ 0.84
EXOSC1Q9Y3B2 AC026202.3-201ENST00000600805 1127 ntBASIC20.32■□□□□ 0.84
EXOSC1Q9Y3B2 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EXOSC1Q9Y3B2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EXOSC1Q9Y3B2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
EXOSC1Q9Y3B2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
EXOSC1Q9Y3B2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
EXOSC1Q9Y3B2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.32■□□□□ 0.84
EXOSC1Q9Y3B2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.32■□□□□ 0.84
EXOSC1Q9Y3B2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EXOSC1Q9Y3B2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
EXOSC1Q9Y3B2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.31■□□□□ 0.84
EXOSC1Q9Y3B2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
EXOSC1Q9Y3B2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
EXOSC1Q9Y3B2 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
EXOSC1Q9Y3B2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EXOSC1Q9Y3B2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
EXOSC1Q9Y3B2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
EXOSC1Q9Y3B2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
EXOSC1Q9Y3B2 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EXOSC1Q9Y3B2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
EXOSC1Q9Y3B2 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EXOSC1Q9Y3B2 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
EXOSC1Q9Y3B2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
EXOSC1Q9Y3B2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
EXOSC1Q9Y3B2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms