Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNIP3Q9Y2W7 AC092068.2-201ENST00000590491 1708 ntBASIC18.96■□□□□ 0.63
KCNIP3Q9Y2W7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNIP3Q9Y2W7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KCNIP3Q9Y2W7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KCNIP3Q9Y2W7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNIP3Q9Y2W7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.95■□□□□ 0.62
KCNIP3Q9Y2W7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNIP3Q9Y2W7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
KCNIP3Q9Y2W7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.95■□□□□ 0.62
KCNIP3Q9Y2W7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
KCNIP3Q9Y2W7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNIP3Q9Y2W7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.95■□□□□ 0.62
KCNIP3Q9Y2W7 CR559946.2-201ENST00000623684 991 ntBASIC18.95■□□□□ 0.62
KCNIP3Q9Y2W7 DUSP8P3-201ENST00000399571 1760 ntBASIC18.95■□□□□ 0.62
KCNIP3Q9Y2W7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.95■□□□□ 0.62
KCNIP3Q9Y2W7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KCNIP3Q9Y2W7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNIP3Q9Y2W7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNIP3Q9Y2W7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
KCNIP3Q9Y2W7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNIP3Q9Y2W7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.94■□□□□ 0.62
KCNIP3Q9Y2W7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
KCNIP3Q9Y2W7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KCNIP3Q9Y2W7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KCNIP3Q9Y2W7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.94■□□□□ 0.62
KCNIP3Q9Y2W7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.94■□□□□ 0.62
KCNIP3Q9Y2W7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KCNIP3Q9Y2W7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.94■□□□□ 0.62
KCNIP3Q9Y2W7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNIP3Q9Y2W7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNIP3Q9Y2W7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
KCNIP3Q9Y2W7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.94■□□□□ 0.62
KCNIP3Q9Y2W7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNIP3Q9Y2W7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.93■□□□□ 0.62
KCNIP3Q9Y2W7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNIP3Q9Y2W7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
KCNIP3Q9Y2W7 RP9P-202ENST00000450133 1212 ntBASIC18.93■□□□□ 0.62
KCNIP3Q9Y2W7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.93■□□□□ 0.62
KCNIP3Q9Y2W7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
KCNIP3Q9Y2W7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
KCNIP3Q9Y2W7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNIP3Q9Y2W7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.93■□□□□ 0.62
KCNIP3Q9Y2W7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNIP3Q9Y2W7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
KCNIP3Q9Y2W7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KCNIP3Q9Y2W7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNIP3Q9Y2W7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
KCNIP3Q9Y2W7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KCNIP3Q9Y2W7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNIP3Q9Y2W7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
KCNIP3Q9Y2W7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.92■□□□□ 0.62
KCNIP3Q9Y2W7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KCNIP3Q9Y2W7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNIP3Q9Y2W7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
KCNIP3Q9Y2W7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.92■□□□□ 0.62
KCNIP3Q9Y2W7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.92■□□□□ 0.62
KCNIP3Q9Y2W7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
KCNIP3Q9Y2W7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
KCNIP3Q9Y2W7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
KCNIP3Q9Y2W7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNIP3Q9Y2W7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
KCNIP3Q9Y2W7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
KCNIP3Q9Y2W7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.91■□□□□ 0.62
KCNIP3Q9Y2W7 AC127496.7-201ENST00000625110 1798 ntBASIC18.91■□□□□ 0.62
KCNIP3Q9Y2W7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.91■□□□□ 0.62
KCNIP3Q9Y2W7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
KCNIP3Q9Y2W7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KCNIP3Q9Y2W7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KCNIP3Q9Y2W7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.91■□□□□ 0.62
KCNIP3Q9Y2W7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KCNIP3Q9Y2W7 C1orf229-201ENST00000623686 2258 ntBASIC18.91■□□□□ 0.62
KCNIP3Q9Y2W7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
KCNIP3Q9Y2W7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.91■□□□□ 0.62
KCNIP3Q9Y2W7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KCNIP3Q9Y2W7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KCNIP3Q9Y2W7 LINC00526-201ENST00000581067 1875 ntBASIC18.9■□□□□ 0.62
KCNIP3Q9Y2W7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
KCNIP3Q9Y2W7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNIP3Q9Y2W7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNIP3Q9Y2W7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNIP3Q9Y2W7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNIP3Q9Y2W7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNIP3Q9Y2W7 AC060814.1-201ENST00000554326 538 ntBASIC18.9■□□□□ 0.62
KCNIP3Q9Y2W7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.9■□□□□ 0.62
KCNIP3Q9Y2W7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNIP3Q9Y2W7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KCNIP3Q9Y2W7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.9■□□□□ 0.62
KCNIP3Q9Y2W7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNIP3Q9Y2W7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNIP3Q9Y2W7 AL161729.1-201ENST00000604104 1402 ntBASIC18.9■□□□□ 0.62
KCNIP3Q9Y2W7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNIP3Q9Y2W7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.9■□□□□ 0.62
KCNIP3Q9Y2W7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KCNIP3Q9Y2W7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
KCNIP3Q9Y2W7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.89■□□□□ 0.62
KCNIP3Q9Y2W7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.89■□□□□ 0.62
KCNIP3Q9Y2W7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
KCNIP3Q9Y2W7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KCNIP3Q9Y2W7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms