Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC26.31■■□□□ 1.8
PTPN22Q9Y2R2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC26.31■■□□□ 1.8
PTPN22Q9Y2R2 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PTPN22Q9Y2R2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.31■■□□□ 1.8
PTPN22Q9Y2R2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PTPN22Q9Y2R2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC26.31■■□□□ 1.8
PTPN22Q9Y2R2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PTPN22Q9Y2R2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
PTPN22Q9Y2R2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PTPN22Q9Y2R2 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PTPN22Q9Y2R2 ESRRAP2-201ENST00000418437 1549 ntBASIC26.3■■□□□ 1.8
PTPN22Q9Y2R2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PTPN22Q9Y2R2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC26.3■■□□□ 1.8
PTPN22Q9Y2R2 AC245100.8-202ENST00000629247 1058 ntBASIC26.3■■□□□ 1.8
PTPN22Q9Y2R2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC26.3■■□□□ 1.8
PTPN22Q9Y2R2 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PTPN22Q9Y2R2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PTPN22Q9Y2R2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PTPN22Q9Y2R2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
PTPN22Q9Y2R2 AC123595.1-201ENST00000440769 1046 ntBASIC26.29■■□□□ 1.8
PTPN22Q9Y2R2 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PTPN22Q9Y2R2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PTPN22Q9Y2R2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PTPN22Q9Y2R2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.28■■□□□ 1.8
PTPN22Q9Y2R2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.28■■□□□ 1.8
PTPN22Q9Y2R2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC26.28■■□□□ 1.8
PTPN22Q9Y2R2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC26.28■■□□□ 1.8
PTPN22Q9Y2R2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC26.28■■□□□ 1.8
PTPN22Q9Y2R2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC26.28■■□□□ 1.8
PTPN22Q9Y2R2 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.28■■□□□ 1.8
PTPN22Q9Y2R2 AC009102.2-201ENST00000606772 1639 ntBASIC26.28■■□□□ 1.8
PTPN22Q9Y2R2 AC027612.3-201ENST00000413684 1047 ntBASIC26.27■■□□□ 1.8
PTPN22Q9Y2R2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC26.27■■□□□ 1.8
PTPN22Q9Y2R2 AC241377.3-202ENST00000626088 1088 ntBASIC26.27■■□□□ 1.8
PTPN22Q9Y2R2 AC241585.3-202ENST00000628937 1088 ntBASIC26.27■■□□□ 1.8
PTPN22Q9Y2R2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC26.27■■□□□ 1.8
PTPN22Q9Y2R2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC26.27■■□□□ 1.8
PTPN22Q9Y2R2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
PTPN22Q9Y2R2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
PTPN22Q9Y2R2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
PTPN22Q9Y2R2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.26■■□□□ 1.79
PTPN22Q9Y2R2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PTPN22Q9Y2R2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
PTPN22Q9Y2R2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
PTPN22Q9Y2R2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC26.26■■□□□ 1.79
PTPN22Q9Y2R2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
PTPN22Q9Y2R2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.26■■□□□ 1.79
PTPN22Q9Y2R2 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PTPN22Q9Y2R2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PTPN22Q9Y2R2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC26.25■■□□□ 1.79
PTPN22Q9Y2R2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PTPN22Q9Y2R2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.25■■□□□ 1.79
PTPN22Q9Y2R2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
PTPN22Q9Y2R2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.25■■□□□ 1.79
PTPN22Q9Y2R2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
PTPN22Q9Y2R2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
PTPN22Q9Y2R2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
PTPN22Q9Y2R2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC26.24■■□□□ 1.79
PTPN22Q9Y2R2 AC126544.1-201ENST00000580842 1059 ntBASIC26.24■■□□□ 1.79
PTPN22Q9Y2R2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PTPN22Q9Y2R2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC26.23■■□□□ 1.79
PTPN22Q9Y2R2 AL358852.1-201ENST00000623174 1268 ntBASIC26.23■■□□□ 1.79
PTPN22Q9Y2R2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
PTPN22Q9Y2R2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PTPN22Q9Y2R2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PTPN22Q9Y2R2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.22■■□□□ 1.79
PTPN22Q9Y2R2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PTPN22Q9Y2R2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC26.22■■□□□ 1.79
PTPN22Q9Y2R2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.22■■□□□ 1.79
PTPN22Q9Y2R2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
PTPN22Q9Y2R2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.22■■□□□ 1.79
PTPN22Q9Y2R2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PTPN22Q9Y2R2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC26.22■■□□□ 1.79
PTPN22Q9Y2R2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC26.22■■□□□ 1.79
PTPN22Q9Y2R2 AC006455.2-201ENST00000429931 906 ntBASIC26.22■■□□□ 1.79
PTPN22Q9Y2R2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PTPN22Q9Y2R2 NTF6G-201ENST00000591094 616 ntBASIC26.22■■□□□ 1.79
PTPN22Q9Y2R2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PTPN22Q9Y2R2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
PTPN22Q9Y2R2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC26.22■■□□□ 1.79
PTPN22Q9Y2R2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PTPN22Q9Y2R2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PTPN22Q9Y2R2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.21■■□□□ 1.79
PTPN22Q9Y2R2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PTPN22Q9Y2R2 TSPY26P-201ENST00000476365 1326 ntBASIC26.21■■□□□ 1.79
PTPN22Q9Y2R2 C17orf82-201ENST00000623772 1530 ntBASIC26.21■■□□□ 1.79
PTPN22Q9Y2R2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PTPN22Q9Y2R2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC26.21■■□□□ 1.79
PTPN22Q9Y2R2 MIR3181-201ENST00000578512 73 ntBASIC26.21■■□□□ 1.79
PTPN22Q9Y2R2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
PTPN22Q9Y2R2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.21■■□□□ 1.79
PTPN22Q9Y2R2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
PTPN22Q9Y2R2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
PTPN22Q9Y2R2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.2■■□□□ 1.78
PTPN22Q9Y2R2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
PTPN22Q9Y2R2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC26.2■■□□□ 1.78
PTPN22Q9Y2R2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC26.2■■□□□ 1.78
PTPN22Q9Y2R2 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PTPN22Q9Y2R2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.19■■□□□ 1.78
PTPN22Q9Y2R2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 183 ms