Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.53■■□□□ 1.04
LHX6Q9UPM6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.53■■□□□ 1.04
LHX6Q9UPM6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
LHX6Q9UPM6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.53■■□□□ 1.04
LHX6Q9UPM6 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.53■■□□□ 1.04
LHX6Q9UPM6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
LHX6Q9UPM6 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LHX6Q9UPM6 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
LHX6Q9UPM6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LHX6Q9UPM6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LHX6Q9UPM6 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.52■■□□□ 1.04
LHX6Q9UPM6 TSPY20P-201ENST00000450910 630 ntBASIC21.52■■□□□ 1.04
LHX6Q9UPM6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.52■■□□□ 1.04
LHX6Q9UPM6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
LHX6Q9UPM6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LHX6Q9UPM6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LHX6Q9UPM6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LHX6Q9UPM6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LHX6Q9UPM6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.52■■□□□ 1.04
LHX6Q9UPM6 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
LHX6Q9UPM6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
LHX6Q9UPM6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LHX6Q9UPM6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LHX6Q9UPM6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LHX6Q9UPM6 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LHX6Q9UPM6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.51■■□□□ 1.03
LHX6Q9UPM6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LHX6Q9UPM6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LHX6Q9UPM6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.51■■□□□ 1.03
LHX6Q9UPM6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.51■■□□□ 1.03
LHX6Q9UPM6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.51■■□□□ 1.03
LHX6Q9UPM6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.51■■□□□ 1.03
LHX6Q9UPM6 CCDC92B-201ENST00000575506 885 ntBASIC21.51■■□□□ 1.03
LHX6Q9UPM6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.51■■□□□ 1.03
LHX6Q9UPM6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LHX6Q9UPM6 AC005703.6-201ENST00000623265 1329 ntBASIC21.51■■□□□ 1.03
LHX6Q9UPM6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LHX6Q9UPM6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.5■■□□□ 1.03
LHX6Q9UPM6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
LHX6Q9UPM6 AC093827.2-201ENST00000512654 315 ntBASIC21.5■■□□□ 1.03
LHX6Q9UPM6 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.5■■□□□ 1.03
LHX6Q9UPM6 AL358852.1-201ENST00000623174 1268 ntBASIC21.5■■□□□ 1.03
LHX6Q9UPM6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.5■■□□□ 1.03
LHX6Q9UPM6 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LHX6Q9UPM6 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LHX6Q9UPM6 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LHX6Q9UPM6 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
LHX6Q9UPM6 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LHX6Q9UPM6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LHX6Q9UPM6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LHX6Q9UPM6 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.49■■□□□ 1.03
LHX6Q9UPM6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.49■■□□□ 1.03
LHX6Q9UPM6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
LHX6Q9UPM6 AL109923.1-201ENST00000618799 583 ntBASIC21.49■■□□□ 1.03
LHX6Q9UPM6 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
LHX6Q9UPM6 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
LHX6Q9UPM6 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LHX6Q9UPM6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LHX6Q9UPM6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LHX6Q9UPM6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.48■■□□□ 1.03
LHX6Q9UPM6 AC126544.1-201ENST00000580842 1059 ntBASIC21.48■■□□□ 1.03
LHX6Q9UPM6 RAP2CP1-201ENST00000605103 478 ntBASIC21.48■■□□□ 1.03
LHX6Q9UPM6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LHX6Q9UPM6 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LHX6Q9UPM6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
LHX6Q9UPM6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
LHX6Q9UPM6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
LHX6Q9UPM6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LHX6Q9UPM6 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
LHX6Q9UPM6 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.47■■□□□ 1.03
LHX6Q9UPM6 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.47■■□□□ 1.03
LHX6Q9UPM6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.47■■□□□ 1.03
LHX6Q9UPM6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.47■■□□□ 1.03
LHX6Q9UPM6 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
LHX6Q9UPM6 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.47■■□□□ 1.03
LHX6Q9UPM6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LHX6Q9UPM6 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LHX6Q9UPM6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
LHX6Q9UPM6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LHX6Q9UPM6 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LHX6Q9UPM6 AC073111.5-205ENST00000641717 521 ntBASIC21.46■■□□□ 1.03
LHX6Q9UPM6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
LHX6Q9UPM6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.46■■□□□ 1.03
LHX6Q9UPM6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LHX6Q9UPM6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.46■■□□□ 1.03
LHX6Q9UPM6 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LHX6Q9UPM6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
LHX6Q9UPM6 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.45■■□□□ 1.02
LHX6Q9UPM6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LHX6Q9UPM6 CDCA4P2-201ENST00000441182 718 ntBASIC21.45■■□□□ 1.02
LHX6Q9UPM6 AC026185.1-201ENST00000445748 174 ntBASIC21.45■■□□□ 1.02
LHX6Q9UPM6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.45■■□□□ 1.02
LHX6Q9UPM6 KRT18P14-201ENST00000534205 1250 ntBASIC21.45■■□□□ 1.02
LHX6Q9UPM6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LHX6Q9UPM6 MIR6084-201ENST00000622012 110 ntBASIC21.45■■□□□ 1.02
LHX6Q9UPM6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.45■■□□□ 1.02
LHX6Q9UPM6 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.45■■□□□ 1.02
LHX6Q9UPM6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.45■■□□□ 1.02
LHX6Q9UPM6 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LHX6Q9UPM6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms