Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHA4Q9UN74 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHA4Q9UN74 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHA4Q9UN74 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHA4Q9UN74 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.15■■□□□ 1.78
PCDHA4Q9UN74 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
PCDHA4Q9UN74 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.15■■□□□ 1.78
PCDHA4Q9UN74 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHA4Q9UN74 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHA4Q9UN74 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.15■■□□□ 1.78
PCDHA4Q9UN74 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHA4Q9UN74 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHA4Q9UN74 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHA4Q9UN74 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.14■■□□□ 1.78
PCDHA4Q9UN74 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHA4Q9UN74 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHA4Q9UN74 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.14■■□□□ 1.78
PCDHA4Q9UN74 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC26.14■■□□□ 1.78
PCDHA4Q9UN74 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.14■■□□□ 1.78
PCDHA4Q9UN74 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PCDHA4Q9UN74 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PCDHA4Q9UN74 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PCDHA4Q9UN74 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
PCDHA4Q9UN74 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHA4Q9UN74 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHA4Q9UN74 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHA4Q9UN74 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHA4Q9UN74 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.13■■□□□ 1.77
PCDHA4Q9UN74 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
PCDHA4Q9UN74 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC26.13■■□□□ 1.77
PCDHA4Q9UN74 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHA4Q9UN74 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.13■■□□□ 1.77
PCDHA4Q9UN74 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHA4Q9UN74 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.12■■□□□ 1.77
PCDHA4Q9UN74 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
PCDHA4Q9UN74 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHA4Q9UN74 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
PCDHA4Q9UN74 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHA4Q9UN74 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.11■■□□□ 1.77
PCDHA4Q9UN74 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHA4Q9UN74 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
PCDHA4Q9UN74 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHA4Q9UN74 KRT16P3-201ENST00000439127 1283 ntBASIC26.11■■□□□ 1.77
PCDHA4Q9UN74 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.11■■□□□ 1.77
PCDHA4Q9UN74 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHA4Q9UN74 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC26.11■■□□□ 1.77
PCDHA4Q9UN74 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHA4Q9UN74 AC005703.6-201ENST00000623265 1329 ntBASIC26.1■■□□□ 1.77
PCDHA4Q9UN74 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC26.1■■□□□ 1.77
PCDHA4Q9UN74 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHA4Q9UN74 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC26.09■■□□□ 1.77
PCDHA4Q9UN74 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.09■■□□□ 1.77
PCDHA4Q9UN74 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
PCDHA4Q9UN74 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.09■■□□□ 1.77
PCDHA4Q9UN74 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHA4Q9UN74 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC26.09■■□□□ 1.77
PCDHA4Q9UN74 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
PCDHA4Q9UN74 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHA4Q9UN74 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PCDHA4Q9UN74 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
PCDHA4Q9UN74 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.08■■□□□ 1.76
PCDHA4Q9UN74 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.08■■□□□ 1.76
PCDHA4Q9UN74 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHA4Q9UN74 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHA4Q9UN74 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.07■■□□□ 1.76
PCDHA4Q9UN74 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHA4Q9UN74 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PCDHA4Q9UN74 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.07■■□□□ 1.76
PCDHA4Q9UN74 MIR6724-1-201ENST00000616420 92 ntBASIC26.07■■□□□ 1.76
PCDHA4Q9UN74 MIR6724-2-201ENST00000616483 92 ntBASIC26.07■■□□□ 1.76
PCDHA4Q9UN74 MIR6724-4-201ENST00000617390 92 ntBASIC26.07■■□□□ 1.76
PCDHA4Q9UN74 MIR6724-3-201ENST00000622482 92 ntBASIC26.07■■□□□ 1.76
PCDHA4Q9UN74 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.07■■□□□ 1.76
PCDHA4Q9UN74 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC26.07■■□□□ 1.76
PCDHA4Q9UN74 USF2-207ENST00000595068 1612 ntTSL 5 BASIC26.06■■□□□ 1.76
PCDHA4Q9UN74 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHA4Q9UN74 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.06■■□□□ 1.76
PCDHA4Q9UN74 AL356441.2-201ENST00000443009 864 ntBASIC26.06■■□□□ 1.76
PCDHA4Q9UN74 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.06■■□□□ 1.76
PCDHA4Q9UN74 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC26.06■■□□□ 1.76
PCDHA4Q9UN74 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.06■■□□□ 1.76
PCDHA4Q9UN74 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHA4Q9UN74 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHA4Q9UN74 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHA4Q9UN74 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHA4Q9UN74 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHA4Q9UN74 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
PCDHA4Q9UN74 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHA4Q9UN74 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHA4Q9UN74 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
PCDHA4Q9UN74 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHA4Q9UN74 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHA4Q9UN74 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC26.04■■□□□ 1.76
PCDHA4Q9UN74 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
PCDHA4Q9UN74 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.04■■□□□ 1.76
PCDHA4Q9UN74 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
PCDHA4Q9UN74 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHA4Q9UN74 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHA4Q9UN74 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHA4Q9UN74 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms