Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC29.46■■■□□ 2.31
CCNL1Q9UK58 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
CCNL1Q9UK58 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
CCNL1Q9UK58 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC29.45■■■□□ 2.31
CCNL1Q9UK58 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
CCNL1Q9UK58 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC29.45■■■□□ 2.31
CCNL1Q9UK58 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC29.45■■■□□ 2.3
CCNL1Q9UK58 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
CCNL1Q9UK58 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC29.45■■■□□ 2.3
CCNL1Q9UK58 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CCNL1Q9UK58 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CCNL1Q9UK58 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
CCNL1Q9UK58 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC29.44■■■□□ 2.3
CCNL1Q9UK58 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC29.44■■■□□ 2.3
CCNL1Q9UK58 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CCNL1Q9UK58 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
CCNL1Q9UK58 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CCNL1Q9UK58 AC027612.3-201ENST00000413684 1047 ntBASIC29.43■■■□□ 2.3
CCNL1Q9UK58 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC29.43■■■□□ 2.3
CCNL1Q9UK58 DENND3-207ENST00000518347 850 ntTSL 2 BASIC29.43■■■□□ 2.3
CCNL1Q9UK58 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC29.43■■■□□ 2.3
CCNL1Q9UK58 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC29.43■■■□□ 2.3
CCNL1Q9UK58 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC29.43■■■□□ 2.3
CCNL1Q9UK58 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
CCNL1Q9UK58 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
CCNL1Q9UK58 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC29.42■■■□□ 2.3
CCNL1Q9UK58 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC29.42■■■□□ 2.3
CCNL1Q9UK58 NKILA-201ENST00000613231 537 ntTSL 4 BASIC29.42■■■□□ 2.3
CCNL1Q9UK58 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
CCNL1Q9UK58 AL022069.1-201ENST00000568025 1636 ntBASIC29.42■■■□□ 2.3
CCNL1Q9UK58 VGF-203ENST00000611537 1622 ntTSL 5 BASIC29.42■■■□□ 2.3
CCNL1Q9UK58 AC123595.1-201ENST00000440769 1046 ntBASIC29.41■■■□□ 2.3
CCNL1Q9UK58 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CCNL1Q9UK58 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC29.41■■■□□ 2.3
CCNL1Q9UK58 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC29.41■■■□□ 2.3
CCNL1Q9UK58 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
CCNL1Q9UK58 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC29.41■■■□□ 2.3
CCNL1Q9UK58 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC29.41■■■□□ 2.3
CCNL1Q9UK58 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
CCNL1Q9UK58 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CCNL1Q9UK58 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
CCNL1Q9UK58 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC29.4■■■□□ 2.3
CCNL1Q9UK58 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC29.4■■■□□ 2.3
CCNL1Q9UK58 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
CCNL1Q9UK58 pRNA.6-201ENST00000610482 90 ntBASIC29.4■■■□□ 2.3
CCNL1Q9UK58 pRNA.5-201ENST00000612139 90 ntBASIC29.4■■■□□ 2.3
CCNL1Q9UK58 pRNA.11-201ENST00000618423 90 ntBASIC29.4■■■□□ 2.3
CCNL1Q9UK58 pRNA.13-201ENST00000619112 90 ntBASIC29.4■■■□□ 2.3
CCNL1Q9UK58 AL358852.1-201ENST00000623174 1268 ntBASIC29.4■■■□□ 2.3
CCNL1Q9UK58 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC29.4■■■□□ 2.3
CCNL1Q9UK58 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
CCNL1Q9UK58 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC29.4■■■□□ 2.3
CCNL1Q9UK58 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CCNL1Q9UK58 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
CCNL1Q9UK58 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC29.39■■■□□ 2.3
CCNL1Q9UK58 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CCNL1Q9UK58 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
CCNL1Q9UK58 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CCNL1Q9UK58 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC29.39■■■□□ 2.3
CCNL1Q9UK58 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
CCNL1Q9UK58 MIR6084-201ENST00000622012 110 ntBASIC29.39■■■□□ 2.3
CCNL1Q9UK58 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC29.39■■■□□ 2.3
CCNL1Q9UK58 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC29.39■■■□□ 2.29
CCNL1Q9UK58 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC29.38■■■□□ 2.29
CCNL1Q9UK58 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC29.38■■■□□ 2.29
CCNL1Q9UK58 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC29.38■■■□□ 2.29
CCNL1Q9UK58 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC29.38■■■□□ 2.29
CCNL1Q9UK58 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CCNL1Q9UK58 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
CCNL1Q9UK58 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CCNL1Q9UK58 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC29.37■■■□□ 2.29
CCNL1Q9UK58 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
CCNL1Q9UK58 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CCNL1Q9UK58 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC29.37■■■□□ 2.29
CCNL1Q9UK58 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC29.37■■■□□ 2.29
CCNL1Q9UK58 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CCNL1Q9UK58 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
CCNL1Q9UK58 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CCNL1Q9UK58 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
CCNL1Q9UK58 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC29.36■■■□□ 2.29
CCNL1Q9UK58 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
CCNL1Q9UK58 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CCNL1Q9UK58 GXYLT1P2-201ENST00000433312 1230 ntBASIC29.36■■■□□ 2.29
CCNL1Q9UK58 AICDA-202ENST00000537228 667 ntTSL 5 BASIC29.36■■■□□ 2.29
CCNL1Q9UK58 VPS53-216ENST00000574029 585 ntTSL 4 BASIC29.36■■■□□ 2.29
CCNL1Q9UK58 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC29.36■■■□□ 2.29
CCNL1Q9UK58 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CCNL1Q9UK58 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC29.36■■■□□ 2.29
CCNL1Q9UK58 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC29.35■■■□□ 2.29
CCNL1Q9UK58 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC29.35■■■□□ 2.29
CCNL1Q9UK58 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC29.35■■■□□ 2.29
CCNL1Q9UK58 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC29.35■■■□□ 2.29
CCNL1Q9UK58 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CCNL1Q9UK58 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CCNL1Q9UK58 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CCNL1Q9UK58 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
CCNL1Q9UK58 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CCNL1Q9UK58 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC29.33■■■□□ 2.29
CCNL1Q9UK58 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CCNL1Q9UK58 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC29.33■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms