Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
HCFC1R1Q9NWW0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.89■■□□□ 1.41
HCFC1R1Q9NWW0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
HCFC1R1Q9NWW0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
HCFC1R1Q9NWW0 AC027682.1-201ENST00000562846 899 ntBASIC23.89■■□□□ 1.41
HCFC1R1Q9NWW0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
HCFC1R1Q9NWW0 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.89■■□□□ 1.41
HCFC1R1Q9NWW0 HLA-L-211ENST00000482052 1765 ntBASIC23.88■■□□□ 1.41
HCFC1R1Q9NWW0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
HCFC1R1Q9NWW0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
HCFC1R1Q9NWW0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
HCFC1R1Q9NWW0 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.88■■□□□ 1.41
HCFC1R1Q9NWW0 AC099791.1-201ENST00000416440 715 ntBASIC23.88■■□□□ 1.41
HCFC1R1Q9NWW0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.88■■□□□ 1.41
HCFC1R1Q9NWW0 AL138724.1-201ENST00000606771 1088 ntBASIC23.88■■□□□ 1.41
HCFC1R1Q9NWW0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
HCFC1R1Q9NWW0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
HCFC1R1Q9NWW0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.87■■□□□ 1.41
HCFC1R1Q9NWW0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
HCFC1R1Q9NWW0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HCFC1R1Q9NWW0 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HCFC1R1Q9NWW0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
HCFC1R1Q9NWW0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
HCFC1R1Q9NWW0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.87■■□□□ 1.41
HCFC1R1Q9NWW0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.87■■□□□ 1.41
HCFC1R1Q9NWW0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
HCFC1R1Q9NWW0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HCFC1R1Q9NWW0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HCFC1R1Q9NWW0 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
HCFC1R1Q9NWW0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
HCFC1R1Q9NWW0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
HCFC1R1Q9NWW0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
HCFC1R1Q9NWW0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
HCFC1R1Q9NWW0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.86■■□□□ 1.41
HCFC1R1Q9NWW0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.86■■□□□ 1.41
HCFC1R1Q9NWW0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
HCFC1R1Q9NWW0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
HCFC1R1Q9NWW0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
HCFC1R1Q9NWW0 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
HCFC1R1Q9NWW0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.85■■□□□ 1.41
HCFC1R1Q9NWW0 AC104564.3-201ENST00000582367 638 ntBASIC23.85■■□□□ 1.41
HCFC1R1Q9NWW0 MIR6821-201ENST00000617625 74 ntBASIC23.85■■□□□ 1.41
HCFC1R1Q9NWW0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.85■■□□□ 1.41
HCFC1R1Q9NWW0 AC241377.3-202ENST00000626088 1088 ntBASIC23.85■■□□□ 1.41
HCFC1R1Q9NWW0 AC241585.3-202ENST00000628937 1088 ntBASIC23.85■■□□□ 1.41
HCFC1R1Q9NWW0 AC245100.8-202ENST00000629247 1058 ntBASIC23.85■■□□□ 1.41
HCFC1R1Q9NWW0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.84■■□□□ 1.41
HCFC1R1Q9NWW0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
HCFC1R1Q9NWW0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
HCFC1R1Q9NWW0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.84■■□□□ 1.41
HCFC1R1Q9NWW0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.84■■□□□ 1.41
HCFC1R1Q9NWW0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.84■■□□□ 1.41
HCFC1R1Q9NWW0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.84■■□□□ 1.41
HCFC1R1Q9NWW0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
HCFC1R1Q9NWW0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
HCFC1R1Q9NWW0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
HCFC1R1Q9NWW0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
HCFC1R1Q9NWW0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.84■■□□□ 1.41
HCFC1R1Q9NWW0 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.84■■□□□ 1.41
HCFC1R1Q9NWW0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HCFC1R1Q9NWW0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HCFC1R1Q9NWW0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
HCFC1R1Q9NWW0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.83■■□□□ 1.41
HCFC1R1Q9NWW0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
HCFC1R1Q9NWW0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.83■■□□□ 1.41
HCFC1R1Q9NWW0 AC087623.3-201ENST00000607047 1098 ntBASIC23.83■■□□□ 1.41
HCFC1R1Q9NWW0 AC009086.3-201ENST00000623486 1008 ntBASIC23.83■■□□□ 1.41
HCFC1R1Q9NWW0 AC136469.2-201ENST00000623944 1028 ntBASIC23.83■■□□□ 1.41
HCFC1R1Q9NWW0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HCFC1R1Q9NWW0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.82■■□□□ 1.4
HCFC1R1Q9NWW0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
HCFC1R1Q9NWW0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
HCFC1R1Q9NWW0 AC097381.1-201ENST00000429019 1296 ntBASIC23.82■■□□□ 1.4
HCFC1R1Q9NWW0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.82■■□□□ 1.4
HCFC1R1Q9NWW0 MIR3181-201ENST00000578512 73 ntBASIC23.82■■□□□ 1.4
HCFC1R1Q9NWW0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.82■■□□□ 1.4
HCFC1R1Q9NWW0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
HCFC1R1Q9NWW0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HCFC1R1Q9NWW0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
HCFC1R1Q9NWW0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
HCFC1R1Q9NWW0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HCFC1R1Q9NWW0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.81■■□□□ 1.4
HCFC1R1Q9NWW0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
HCFC1R1Q9NWW0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
HCFC1R1Q9NWW0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.81■■□□□ 1.4
HCFC1R1Q9NWW0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.81■■□□□ 1.4
HCFC1R1Q9NWW0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.81■■□□□ 1.4
HCFC1R1Q9NWW0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.81■■□□□ 1.4
HCFC1R1Q9NWW0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HCFC1R1Q9NWW0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HCFC1R1Q9NWW0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
HCFC1R1Q9NWW0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
HCFC1R1Q9NWW0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.8■■□□□ 1.4
HCFC1R1Q9NWW0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
HCFC1R1Q9NWW0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HCFC1R1Q9NWW0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
HCFC1R1Q9NWW0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
HCFC1R1Q9NWW0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
HCFC1R1Q9NWW0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HCFC1R1Q9NWW0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms