Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBQLN4Q9NRR5 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBQLN4Q9NRR5 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.95■□□□□ 0.94
UBQLN4Q9NRR5 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBQLN4Q9NRR5 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.94■□□□□ 0.94
UBQLN4Q9NRR5 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.94■□□□□ 0.94
UBQLN4Q9NRR5 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBQLN4Q9NRR5 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.94■□□□□ 0.94
UBQLN4Q9NRR5 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBQLN4Q9NRR5 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBQLN4Q9NRR5 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBQLN4Q9NRR5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.94■□□□□ 0.94
UBQLN4Q9NRR5 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.94■□□□□ 0.94
UBQLN4Q9NRR5 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.94■□□□□ 0.94
UBQLN4Q9NRR5 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
UBQLN4Q9NRR5 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
UBQLN4Q9NRR5 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.93■□□□□ 0.94
UBQLN4Q9NRR5 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.93■□□□□ 0.94
UBQLN4Q9NRR5 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBQLN4Q9NRR5 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBQLN4Q9NRR5 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
UBQLN4Q9NRR5 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
UBQLN4Q9NRR5 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBQLN4Q9NRR5 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBQLN4Q9NRR5 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBQLN4Q9NRR5 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.93■□□□□ 0.94
UBQLN4Q9NRR5 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.93■□□□□ 0.94
UBQLN4Q9NRR5 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.93■□□□□ 0.94
UBQLN4Q9NRR5 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.93■□□□□ 0.94
UBQLN4Q9NRR5 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
UBQLN4Q9NRR5 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
UBQLN4Q9NRR5 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBQLN4Q9NRR5 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
UBQLN4Q9NRR5 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBQLN4Q9NRR5 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBQLN4Q9NRR5 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
UBQLN4Q9NRR5 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBQLN4Q9NRR5 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
UBQLN4Q9NRR5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
UBQLN4Q9NRR5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.92■□□□□ 0.94
UBQLN4Q9NRR5 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.92■□□□□ 0.94
UBQLN4Q9NRR5 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBQLN4Q9NRR5 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBQLN4Q9NRR5 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
UBQLN4Q9NRR5 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.92■□□□□ 0.94
UBQLN4Q9NRR5 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBQLN4Q9NRR5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBQLN4Q9NRR5 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBQLN4Q9NRR5 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBQLN4Q9NRR5 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
UBQLN4Q9NRR5 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBQLN4Q9NRR5 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
UBQLN4Q9NRR5 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBQLN4Q9NRR5 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.91■□□□□ 0.94
UBQLN4Q9NRR5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
UBQLN4Q9NRR5 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBQLN4Q9NRR5 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBQLN4Q9NRR5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.91■□□□□ 0.94
UBQLN4Q9NRR5 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.91■□□□□ 0.94
UBQLN4Q9NRR5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
UBQLN4Q9NRR5 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBQLN4Q9NRR5 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.9■□□□□ 0.94
UBQLN4Q9NRR5 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.9■□□□□ 0.94
UBQLN4Q9NRR5 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.9■□□□□ 0.94
UBQLN4Q9NRR5 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.9■□□□□ 0.94
UBQLN4Q9NRR5 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBQLN4Q9NRR5 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBQLN4Q9NRR5 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.9■□□□□ 0.94
UBQLN4Q9NRR5 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.9■□□□□ 0.94
UBQLN4Q9NRR5 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBQLN4Q9NRR5 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBQLN4Q9NRR5 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBQLN4Q9NRR5 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.89■□□□□ 0.93
UBQLN4Q9NRR5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.89■□□□□ 0.93
UBQLN4Q9NRR5 MTDHP2-201ENST00000601468 714 ntBASIC20.89■□□□□ 0.93
UBQLN4Q9NRR5 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBQLN4Q9NRR5 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBQLN4Q9NRR5 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.89■□□□□ 0.93
UBQLN4Q9NRR5 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.89■□□□□ 0.93
UBQLN4Q9NRR5 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBQLN4Q9NRR5 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.89■□□□□ 0.93
UBQLN4Q9NRR5 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBQLN4Q9NRR5 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBQLN4Q9NRR5 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
UBQLN4Q9NRR5 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBQLN4Q9NRR5 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
UBQLN4Q9NRR5 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
UBQLN4Q9NRR5 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBQLN4Q9NRR5 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
UBQLN4Q9NRR5 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
UBQLN4Q9NRR5 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
UBQLN4Q9NRR5 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
UBQLN4Q9NRR5 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBQLN4Q9NRR5 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
UBQLN4Q9NRR5 AC005703.6-201ENST00000623265 1329 ntBASIC20.87■□□□□ 0.93
UBQLN4Q9NRR5 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBQLN4Q9NRR5 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
UBQLN4Q9NRR5 TSPY9P-201ENST00000440215 945 ntBASIC20.87■□□□□ 0.93
UBQLN4Q9NRR5 TSPY11P-201ENST00000442607 1045 ntBASIC20.87■□□□□ 0.93
UBQLN4Q9NRR5 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms