Protein–RNA interactions for Protein: Q9NRJ4

TULP4, Tubby-related protein 4, humanhuman

Predictions only

Length 1,543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TULP4Q9NRJ4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC31.89■■■□□ 2.7
TULP4Q9NRJ4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC31.89■■■□□ 2.7
TULP4Q9NRJ4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
TULP4Q9NRJ4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
TULP4Q9NRJ4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
TULP4Q9NRJ4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC31.88■■■□□ 2.69
TULP4Q9NRJ4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC31.88■■■□□ 2.69
TULP4Q9NRJ4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC31.88■■■□□ 2.69
TULP4Q9NRJ4 AC099791.2-201ENST00000605725 427 ntBASIC31.88■■■□□ 2.69
TULP4Q9NRJ4 AL138724.1-201ENST00000606771 1088 ntBASIC31.88■■■□□ 2.69
TULP4Q9NRJ4 MIR6821-201ENST00000617625 74 ntBASIC31.88■■■□□ 2.69
TULP4Q9NRJ4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC31.88■■■□□ 2.69
TULP4Q9NRJ4 AC009102.2-201ENST00000606772 1639 ntBASIC31.87■■■□□ 2.69
TULP4Q9NRJ4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
TULP4Q9NRJ4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
TULP4Q9NRJ4 RASA4CP-201ENST00000424092 1398 ntBASIC31.87■■■□□ 2.69
TULP4Q9NRJ4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
TULP4Q9NRJ4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC31.87■■■□□ 2.69
TULP4Q9NRJ4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
TULP4Q9NRJ4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
TULP4Q9NRJ4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
TULP4Q9NRJ4 ANKRD20A6P-201ENST00000618763 204 ntBASIC31.85■■■□□ 2.69
TULP4Q9NRJ4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC31.85■■■□□ 2.69
TULP4Q9NRJ4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
TULP4Q9NRJ4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
TULP4Q9NRJ4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
TULP4Q9NRJ4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
TULP4Q9NRJ4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
TULP4Q9NRJ4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
TULP4Q9NRJ4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC31.85■■■□□ 2.69
TULP4Q9NRJ4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
TULP4Q9NRJ4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC31.85■■■□□ 2.69
TULP4Q9NRJ4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
TULP4Q9NRJ4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC31.84■■■□□ 2.69
TULP4Q9NRJ4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
TULP4Q9NRJ4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
TULP4Q9NRJ4 AC097381.1-201ENST00000429019 1296 ntBASIC31.84■■■□□ 2.69
TULP4Q9NRJ4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC31.84■■■□□ 2.69
TULP4Q9NRJ4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
TULP4Q9NRJ4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC31.83■■■□□ 2.69
TULP4Q9NRJ4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC31.83■■■□□ 2.69
TULP4Q9NRJ4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC31.83■■■□□ 2.69
TULP4Q9NRJ4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
TULP4Q9NRJ4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
TULP4Q9NRJ4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC31.82■■■□□ 2.68
TULP4Q9NRJ4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC31.82■■■□□ 2.68
TULP4Q9NRJ4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC31.82■■■□□ 2.68
TULP4Q9NRJ4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
TULP4Q9NRJ4 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
TULP4Q9NRJ4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
TULP4Q9NRJ4 AC136469.2-201ENST00000623944 1028 ntBASIC31.81■■■□□ 2.68
TULP4Q9NRJ4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
TULP4Q9NRJ4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC31.81■■■□□ 2.68
TULP4Q9NRJ4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
TULP4Q9NRJ4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
TULP4Q9NRJ4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC31.8■■■□□ 2.68
TULP4Q9NRJ4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC31.8■■■□□ 2.68
TULP4Q9NRJ4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
TULP4Q9NRJ4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
TULP4Q9NRJ4 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
TULP4Q9NRJ4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
TULP4Q9NRJ4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC31.8■■■□□ 2.68
TULP4Q9NRJ4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
TULP4Q9NRJ4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
TULP4Q9NRJ4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
TULP4Q9NRJ4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC31.79■■■□□ 2.68
TULP4Q9NRJ4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
TULP4Q9NRJ4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
TULP4Q9NRJ4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
TULP4Q9NRJ4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC31.79■■■□□ 2.68
TULP4Q9NRJ4 AC006455.2-201ENST00000429931 906 ntBASIC31.79■■■□□ 2.68
TULP4Q9NRJ4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC31.79■■■□□ 2.68
TULP4Q9NRJ4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
TULP4Q9NRJ4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
TULP4Q9NRJ4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
TULP4Q9NRJ4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC31.78■■■□□ 2.68
TULP4Q9NRJ4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
TULP4Q9NRJ4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC31.78■■■□□ 2.68
TULP4Q9NRJ4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC31.78■■■□□ 2.68
TULP4Q9NRJ4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC31.78■■■□□ 2.68
TULP4Q9NRJ4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC31.78■■■□□ 2.68
TULP4Q9NRJ4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
TULP4Q9NRJ4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
TULP4Q9NRJ4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC31.77■■■□□ 2.68
TULP4Q9NRJ4 AC087623.3-201ENST00000607047 1098 ntBASIC31.77■■■□□ 2.68
TULP4Q9NRJ4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
TULP4Q9NRJ4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
TULP4Q9NRJ4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
TULP4Q9NRJ4 AC022211.4-201ENST00000625094 2161 ntBASIC31.77■■■□□ 2.68
TULP4Q9NRJ4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
TULP4Q9NRJ4 AC099791.1-201ENST00000416440 715 ntBASIC31.76■■■□□ 2.68
TULP4Q9NRJ4 AL161729.1-201ENST00000604104 1402 ntBASIC31.76■■■□□ 2.67
TULP4Q9NRJ4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
TULP4Q9NRJ4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC31.75■■■□□ 2.67
TULP4Q9NRJ4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
TULP4Q9NRJ4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC31.75■■■□□ 2.67
TULP4Q9NRJ4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
TULP4Q9NRJ4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
TULP4Q9NRJ4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC31.75■■■□□ 2.67
TULP4Q9NRJ4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms