Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NELFAQ9H3P2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.22■□□□□ 0.83
NELFAQ9H3P2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NELFAQ9H3P2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NELFAQ9H3P2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NELFAQ9H3P2 SNX5-217ENST00000606557 1087 ntBASIC20.22■□□□□ 0.83
NELFAQ9H3P2 AC092028.1-203ENST00000608262 953 ntBASIC20.22■□□□□ 0.83
NELFAQ9H3P2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NELFAQ9H3P2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NELFAQ9H3P2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.21■□□□□ 0.83
NELFAQ9H3P2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NELFAQ9H3P2 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NELFAQ9H3P2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.21■□□□□ 0.83
NELFAQ9H3P2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.21■□□□□ 0.83
NELFAQ9H3P2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.21■□□□□ 0.83
NELFAQ9H3P2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NELFAQ9H3P2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.21■□□□□ 0.83
NELFAQ9H3P2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NELFAQ9H3P2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NELFAQ9H3P2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NELFAQ9H3P2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NELFAQ9H3P2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NELFAQ9H3P2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NELFAQ9H3P2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NELFAQ9H3P2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NELFAQ9H3P2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.2■□□□□ 0.82
NELFAQ9H3P2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.2■□□□□ 0.82
NELFAQ9H3P2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NELFAQ9H3P2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.2■□□□□ 0.82
NELFAQ9H3P2 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NELFAQ9H3P2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.19■□□□□ 0.82
NELFAQ9H3P2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.19■□□□□ 0.82
NELFAQ9H3P2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.19■□□□□ 0.82
NELFAQ9H3P2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.19■□□□□ 0.82
NELFAQ9H3P2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NELFAQ9H3P2 UNC93B8-201ENST00000511903 705 ntBASIC20.19■□□□□ 0.82
NELFAQ9H3P2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.19■□□□□ 0.82
NELFAQ9H3P2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NELFAQ9H3P2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NELFAQ9H3P2 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NELFAQ9H3P2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NELFAQ9H3P2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.19■□□□□ 0.82
NELFAQ9H3P2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NELFAQ9H3P2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NELFAQ9H3P2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.18■□□□□ 0.82
NELFAQ9H3P2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NELFAQ9H3P2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NELFAQ9H3P2 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NELFAQ9H3P2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.18■□□□□ 0.82
NELFAQ9H3P2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
NELFAQ9H3P2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.18■□□□□ 0.82
NELFAQ9H3P2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NELFAQ9H3P2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NELFAQ9H3P2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.17■□□□□ 0.82
NELFAQ9H3P2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NELFAQ9H3P2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NELFAQ9H3P2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NELFAQ9H3P2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NELFAQ9H3P2 AC004448.1-201ENST00000458332 883 ntBASIC20.17■□□□□ 0.82
NELFAQ9H3P2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.17■□□□□ 0.82
NELFAQ9H3P2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.17■□□□□ 0.82
NELFAQ9H3P2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.17■□□□□ 0.82
NELFAQ9H3P2 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NELFAQ9H3P2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NELFAQ9H3P2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NELFAQ9H3P2 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
NELFAQ9H3P2 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NELFAQ9H3P2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.16■□□□□ 0.82
NELFAQ9H3P2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NELFAQ9H3P2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NELFAQ9H3P2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NELFAQ9H3P2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NELFAQ9H3P2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NELFAQ9H3P2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NELFAQ9H3P2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
NELFAQ9H3P2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NELFAQ9H3P2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.16■□□□□ 0.82
NELFAQ9H3P2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.16■□□□□ 0.82
NELFAQ9H3P2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.16■□□□□ 0.82
NELFAQ9H3P2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.16■□□□□ 0.82
NELFAQ9H3P2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.16■□□□□ 0.82
NELFAQ9H3P2 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NELFAQ9H3P2 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NELFAQ9H3P2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NELFAQ9H3P2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NELFAQ9H3P2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.16■□□□□ 0.82
NELFAQ9H3P2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.16■□□□□ 0.82
NELFAQ9H3P2 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NELFAQ9H3P2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
NELFAQ9H3P2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
NELFAQ9H3P2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.15■□□□□ 0.82
NELFAQ9H3P2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.15■□□□□ 0.82
NELFAQ9H3P2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
NELFAQ9H3P2 TSPY9P-201ENST00000440215 945 ntBASIC20.15■□□□□ 0.82
NELFAQ9H3P2 TSPY11P-201ENST00000442607 1045 ntBASIC20.15■□□□□ 0.82
NELFAQ9H3P2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.15■□□□□ 0.82
NELFAQ9H3P2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
NELFAQ9H3P2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NELFAQ9H3P2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NELFAQ9H3P2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 174.4 ms