Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SNX25Q9H3E2 AC008406.3-201ENST00000620001 1374 ntBASIC24.33■■□□□ 1.49
SNX25Q9H3E2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.33■■□□□ 1.49
SNX25Q9H3E2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.33■■□□□ 1.49
SNX25Q9H3E2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC24.33■■□□□ 1.49
SNX25Q9H3E2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.33■■□□□ 1.49
SNX25Q9H3E2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
SNX25Q9H3E2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SNX25Q9H3E2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
SNX25Q9H3E2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SNX25Q9H3E2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
SNX25Q9H3E2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
SNX25Q9H3E2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
SNX25Q9H3E2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
SNX25Q9H3E2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
SNX25Q9H3E2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
SNX25Q9H3E2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
SNX25Q9H3E2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.31■■□□□ 1.48
SNX25Q9H3E2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SNX25Q9H3E2 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SNX25Q9H3E2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
SNX25Q9H3E2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SNX25Q9H3E2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SNX25Q9H3E2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
SNX25Q9H3E2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.3■■□□□ 1.48
SNX25Q9H3E2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
SNX25Q9H3E2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.3■■□□□ 1.48
SNX25Q9H3E2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
SNX25Q9H3E2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.3■■□□□ 1.48
SNX25Q9H3E2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SNX25Q9H3E2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
SNX25Q9H3E2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SNX25Q9H3E2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SNX25Q9H3E2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SNX25Q9H3E2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SNX25Q9H3E2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SNX25Q9H3E2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
SNX25Q9H3E2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SNX25Q9H3E2 AC131281.2-201ENST00000520478 145 ntBASIC24.29■■□□□ 1.48
SNX25Q9H3E2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC24.29■■□□□ 1.48
SNX25Q9H3E2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SNX25Q9H3E2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SNX25Q9H3E2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SNX25Q9H3E2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SNX25Q9H3E2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SNX25Q9H3E2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.29■■□□□ 1.48
SNX25Q9H3E2 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
SNX25Q9H3E2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.28■■□□□ 1.48
SNX25Q9H3E2 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
SNX25Q9H3E2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.28■■□□□ 1.48
SNX25Q9H3E2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SNX25Q9H3E2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.28■■□□□ 1.48
SNX25Q9H3E2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SNX25Q9H3E2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.28■■□□□ 1.48
SNX25Q9H3E2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
SNX25Q9H3E2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
SNX25Q9H3E2 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.27■■□□□ 1.48
SNX25Q9H3E2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SNX25Q9H3E2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.27■■□□□ 1.48
SNX25Q9H3E2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SNX25Q9H3E2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.27■■□□□ 1.48
SNX25Q9H3E2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SNX25Q9H3E2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SNX25Q9H3E2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.27■■□□□ 1.48
SNX25Q9H3E2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
SNX25Q9H3E2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SNX25Q9H3E2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.27■■□□□ 1.48
SNX25Q9H3E2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SNX25Q9H3E2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SNX25Q9H3E2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
SNX25Q9H3E2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.26■■□□□ 1.47
SNX25Q9H3E2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SNX25Q9H3E2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
SNX25Q9H3E2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SNX25Q9H3E2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SNX25Q9H3E2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.25■■□□□ 1.47
SNX25Q9H3E2 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SNX25Q9H3E2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SNX25Q9H3E2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.25■■□□□ 1.47
SNX25Q9H3E2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.25■■□□□ 1.47
SNX25Q9H3E2 AL512631.2-201ENST00000604634 923 ntBASIC24.25■■□□□ 1.47
SNX25Q9H3E2 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.25■■□□□ 1.47
SNX25Q9H3E2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SNX25Q9H3E2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SNX25Q9H3E2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
SNX25Q9H3E2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
SNX25Q9H3E2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SNX25Q9H3E2 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
SNX25Q9H3E2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SNX25Q9H3E2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
SNX25Q9H3E2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC24.24■■□□□ 1.47
SNX25Q9H3E2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC24.24■■□□□ 1.47
SNX25Q9H3E2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SNX25Q9H3E2 AL136116.3-201ENST00000402907 1138 ntBASIC24.23■■□□□ 1.47
SNX25Q9H3E2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.23■■□□□ 1.47
SNX25Q9H3E2 MIR4466-201ENST00000606121 54 ntBASIC24.23■■□□□ 1.47
SNX25Q9H3E2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC24.23■■□□□ 1.47
SNX25Q9H3E2 AC004812.2-201ENST00000611079 2094 ntBASIC24.23■■□□□ 1.47
SNX25Q9H3E2 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
SNX25Q9H3E2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms