Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.72■■□□□ 1.39
DDX47Q9H0S4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
DDX47Q9H0S4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
DDX47Q9H0S4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.72■■□□□ 1.39
DDX47Q9H0S4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
DDX47Q9H0S4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
DDX47Q9H0S4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
DDX47Q9H0S4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
DDX47Q9H0S4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
DDX47Q9H0S4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
DDX47Q9H0S4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
DDX47Q9H0S4 AL161729.1-201ENST00000604104 1402 ntBASIC23.71■■□□□ 1.39
DDX47Q9H0S4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
DDX47Q9H0S4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
DDX47Q9H0S4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
DDX47Q9H0S4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.71■■□□□ 1.39
DDX47Q9H0S4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
DDX47Q9H0S4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.71■■□□□ 1.39
DDX47Q9H0S4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
DDX47Q9H0S4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.7■■□□□ 1.39
DDX47Q9H0S4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.7■■□□□ 1.39
DDX47Q9H0S4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.7■■□□□ 1.38
DDX47Q9H0S4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
DDX47Q9H0S4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
DDX47Q9H0S4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
DDX47Q9H0S4 SPCS2P3-201ENST00000500401 656 ntBASIC23.7■■□□□ 1.38
DDX47Q9H0S4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
DDX47Q9H0S4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
DDX47Q9H0S4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
DDX47Q9H0S4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX47Q9H0S4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
DDX47Q9H0S4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
DDX47Q9H0S4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX47Q9H0S4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
DDX47Q9H0S4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
DDX47Q9H0S4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX47Q9H0S4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX47Q9H0S4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
DDX47Q9H0S4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
DDX47Q9H0S4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
DDX47Q9H0S4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
DDX47Q9H0S4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
DDX47Q9H0S4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
DDX47Q9H0S4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
DDX47Q9H0S4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
DDX47Q9H0S4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.67■■□□□ 1.38
DDX47Q9H0S4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
DDX47Q9H0S4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
DDX47Q9H0S4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
DDX47Q9H0S4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
DDX47Q9H0S4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
DDX47Q9H0S4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
DDX47Q9H0S4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
DDX47Q9H0S4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
DDX47Q9H0S4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
DDX47Q9H0S4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.66■■□□□ 1.38
DDX47Q9H0S4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.66■■□□□ 1.38
DDX47Q9H0S4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
DDX47Q9H0S4 AL592295.1-201ENST00000400984 884 ntBASIC23.66■■□□□ 1.38
DDX47Q9H0S4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
DDX47Q9H0S4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.66■■□□□ 1.38
DDX47Q9H0S4 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
DDX47Q9H0S4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
DDX47Q9H0S4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
DDX47Q9H0S4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
DDX47Q9H0S4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
DDX47Q9H0S4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
DDX47Q9H0S4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX47Q9H0S4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX47Q9H0S4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.65■■□□□ 1.38
DDX47Q9H0S4 GUSBP5-202ENST00000510805 1989 ntBASIC23.65■■□□□ 1.38
DDX47Q9H0S4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
DDX47Q9H0S4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX47Q9H0S4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX47Q9H0S4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX47Q9H0S4 MIR4449-201ENST00000578365 66 ntBASIC23.65■■□□□ 1.38
DDX47Q9H0S4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
DDX47Q9H0S4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX47Q9H0S4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX47Q9H0S4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX47Q9H0S4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
DDX47Q9H0S4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
DDX47Q9H0S4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
DDX47Q9H0S4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
DDX47Q9H0S4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
DDX47Q9H0S4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
DDX47Q9H0S4 AL592293.1-201ENST00000502889 1188 ntBASIC23.64■■□□□ 1.37
DDX47Q9H0S4 AC087393.1-201ENST00000582896 145 ntBASIC23.64■■□□□ 1.37
DDX47Q9H0S4 AC018755.3-202ENST00000596210 929 ntBASIC23.64■■□□□ 1.37
DDX47Q9H0S4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
DDX47Q9H0S4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.37
DDX47Q9H0S4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
DDX47Q9H0S4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
DDX47Q9H0S4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
DDX47Q9H0S4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
DDX47Q9H0S4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
DDX47Q9H0S4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
DDX47Q9H0S4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
DDX47Q9H0S4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.63■■□□□ 1.37
DDX47Q9H0S4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms