Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
ZKSCAN3Q9BRR0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
ZKSCAN3Q9BRR0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
ZKSCAN3Q9BRR0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
ZKSCAN3Q9BRR0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC26.86■■□□□ 1.89
ZKSCAN3Q9BRR0 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.86■■□□□ 1.89
ZKSCAN3Q9BRR0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.86■■□□□ 1.89
ZKSCAN3Q9BRR0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.86■■□□□ 1.89
ZKSCAN3Q9BRR0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.86■■□□□ 1.89
ZKSCAN3Q9BRR0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
ZKSCAN3Q9BRR0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC26.86■■□□□ 1.89
ZKSCAN3Q9BRR0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
ZKSCAN3Q9BRR0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
ZKSCAN3Q9BRR0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26.85■■□□□ 1.89
ZKSCAN3Q9BRR0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.85■■□□□ 1.89
ZKSCAN3Q9BRR0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC26.85■■□□□ 1.89
ZKSCAN3Q9BRR0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
ZKSCAN3Q9BRR0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
ZKSCAN3Q9BRR0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.84■■□□□ 1.89
ZKSCAN3Q9BRR0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.84■■□□□ 1.89
ZKSCAN3Q9BRR0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.84■■□□□ 1.89
ZKSCAN3Q9BRR0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.84■■□□□ 1.89
ZKSCAN3Q9BRR0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
ZKSCAN3Q9BRR0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
ZKSCAN3Q9BRR0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.84■■□□□ 1.89
ZKSCAN3Q9BRR0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC26.83■■□□□ 1.89
ZKSCAN3Q9BRR0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
ZKSCAN3Q9BRR0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC26.83■■□□□ 1.89
ZKSCAN3Q9BRR0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.83■■□□□ 1.89
ZKSCAN3Q9BRR0 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.83■■□□□ 1.89
ZKSCAN3Q9BRR0 MIR3621-201ENST00000580529 85 ntBASIC26.83■■□□□ 1.89
ZKSCAN3Q9BRR0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
ZKSCAN3Q9BRR0 AC005703.6-201ENST00000623265 1329 ntBASIC26.83■■□□□ 1.89
ZKSCAN3Q9BRR0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
ZKSCAN3Q9BRR0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ZKSCAN3Q9BRR0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
ZKSCAN3Q9BRR0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
ZKSCAN3Q9BRR0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
ZKSCAN3Q9BRR0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.82■■□□□ 1.88
ZKSCAN3Q9BRR0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.82■■□□□ 1.88
ZKSCAN3Q9BRR0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC26.82■■□□□ 1.88
ZKSCAN3Q9BRR0 AC093323.1-202ENST00000635031 2045 ntBASIC26.82■■□□□ 1.88
ZKSCAN3Q9BRR0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ZKSCAN3Q9BRR0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
ZKSCAN3Q9BRR0 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
ZKSCAN3Q9BRR0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.81■■□□□ 1.88
ZKSCAN3Q9BRR0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ZKSCAN3Q9BRR0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC26.81■■□□□ 1.88
ZKSCAN3Q9BRR0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.81■■□□□ 1.88
ZKSCAN3Q9BRR0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ZKSCAN3Q9BRR0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ZKSCAN3Q9BRR0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ZKSCAN3Q9BRR0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ZKSCAN3Q9BRR0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
ZKSCAN3Q9BRR0 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.81■■□□□ 1.88
ZKSCAN3Q9BRR0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
ZKSCAN3Q9BRR0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ZKSCAN3Q9BRR0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC26.81■■□□□ 1.88
ZKSCAN3Q9BRR0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
ZKSCAN3Q9BRR0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC26.81■■□□□ 1.88
ZKSCAN3Q9BRR0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC26.81■■□□□ 1.88
ZKSCAN3Q9BRR0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
ZKSCAN3Q9BRR0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC26.8■■□□□ 1.88
ZKSCAN3Q9BRR0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.8■■□□□ 1.88
ZKSCAN3Q9BRR0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
ZKSCAN3Q9BRR0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
ZKSCAN3Q9BRR0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
ZKSCAN3Q9BRR0 AL356740.2-201ENST00000601559 647 ntBASIC26.8■■□□□ 1.88
ZKSCAN3Q9BRR0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
ZKSCAN3Q9BRR0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
ZKSCAN3Q9BRR0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
ZKSCAN3Q9BRR0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
ZKSCAN3Q9BRR0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC26.79■■□□□ 1.88
ZKSCAN3Q9BRR0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.79■■□□□ 1.88
ZKSCAN3Q9BRR0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
ZKSCAN3Q9BRR0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ZKSCAN3Q9BRR0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
ZKSCAN3Q9BRR0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.79■■□□□ 1.88
ZKSCAN3Q9BRR0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.79■■□□□ 1.88
ZKSCAN3Q9BRR0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.79■■□□□ 1.88
ZKSCAN3Q9BRR0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ZKSCAN3Q9BRR0 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ZKSCAN3Q9BRR0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
ZKSCAN3Q9BRR0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
ZKSCAN3Q9BRR0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.78■■□□□ 1.88
ZKSCAN3Q9BRR0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.78■■□□□ 1.88
ZKSCAN3Q9BRR0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.78■■□□□ 1.88
ZKSCAN3Q9BRR0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.78■■□□□ 1.88
ZKSCAN3Q9BRR0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC26.77■■□□□ 1.88
ZKSCAN3Q9BRR0 AC131281.2-201ENST00000520478 145 ntBASIC26.77■■□□□ 1.88
ZKSCAN3Q9BRR0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
ZKSCAN3Q9BRR0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ZKSCAN3Q9BRR0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.77■■□□□ 1.88
ZKSCAN3Q9BRR0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
ZKSCAN3Q9BRR0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
ZKSCAN3Q9BRR0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
ZKSCAN3Q9BRR0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
ZKSCAN3Q9BRR0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
ZKSCAN3Q9BRR0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
ZKSCAN3Q9BRR0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms