Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEC22CQ9BRL7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SEC22CQ9BRL7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.22■□□□□ 0.67
SEC22CQ9BRL7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.22■□□□□ 0.67
SEC22CQ9BRL7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEC22CQ9BRL7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEC22CQ9BRL7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEC22CQ9BRL7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.22■□□□□ 0.67
SEC22CQ9BRL7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SEC22CQ9BRL7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.21■□□□□ 0.67
SEC22CQ9BRL7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SEC22CQ9BRL7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEC22CQ9BRL7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEC22CQ9BRL7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.21■□□□□ 0.67
SEC22CQ9BRL7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
SEC22CQ9BRL7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEC22CQ9BRL7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SEC22CQ9BRL7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.21■□□□□ 0.67
SEC22CQ9BRL7 AC148477.6-201ENST00000623746 465 ntBASIC19.21■□□□□ 0.67
SEC22CQ9BRL7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SEC22CQ9BRL7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SEC22CQ9BRL7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SEC22CQ9BRL7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SEC22CQ9BRL7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.2■□□□□ 0.66
SEC22CQ9BRL7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SEC22CQ9BRL7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SEC22CQ9BRL7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.2■□□□□ 0.66
SEC22CQ9BRL7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.2■□□□□ 0.66
SEC22CQ9BRL7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SEC22CQ9BRL7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SEC22CQ9BRL7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SEC22CQ9BRL7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SEC22CQ9BRL7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SEC22CQ9BRL7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SEC22CQ9BRL7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEC22CQ9BRL7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SEC22CQ9BRL7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.19■□□□□ 0.66
SEC22CQ9BRL7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEC22CQ9BRL7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SEC22CQ9BRL7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEC22CQ9BRL7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.19■□□□□ 0.66
SEC22CQ9BRL7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SEC22CQ9BRL7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.18■□□□□ 0.66
SEC22CQ9BRL7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SEC22CQ9BRL7 AC242852.2-201ENST00000615738 1807 ntBASIC19.18■□□□□ 0.66
SEC22CQ9BRL7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SEC22CQ9BRL7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SEC22CQ9BRL7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SEC22CQ9BRL7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.18■□□□□ 0.66
SEC22CQ9BRL7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SEC22CQ9BRL7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SEC22CQ9BRL7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
SEC22CQ9BRL7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SEC22CQ9BRL7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SEC22CQ9BRL7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SEC22CQ9BRL7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SEC22CQ9BRL7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SEC22CQ9BRL7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEC22CQ9BRL7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEC22CQ9BRL7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SEC22CQ9BRL7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEC22CQ9BRL7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.17■□□□□ 0.66
SEC22CQ9BRL7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.17■□□□□ 0.66
SEC22CQ9BRL7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEC22CQ9BRL7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEC22CQ9BRL7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SEC22CQ9BRL7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEC22CQ9BRL7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
SEC22CQ9BRL7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEC22CQ9BRL7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEC22CQ9BRL7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SEC22CQ9BRL7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEC22CQ9BRL7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEC22CQ9BRL7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SEC22CQ9BRL7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SEC22CQ9BRL7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SEC22CQ9BRL7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEC22CQ9BRL7 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.16■□□□□ 0.66
SEC22CQ9BRL7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
SEC22CQ9BRL7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEC22CQ9BRL7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEC22CQ9BRL7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.16■□□□□ 0.66
SEC22CQ9BRL7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.16■□□□□ 0.66
SEC22CQ9BRL7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEC22CQ9BRL7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEC22CQ9BRL7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEC22CQ9BRL7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.15■□□□□ 0.66
SEC22CQ9BRL7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SEC22CQ9BRL7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEC22CQ9BRL7 AC008813.1-201ENST00000536597 885 ntBASIC19.15■□□□□ 0.66
SEC22CQ9BRL7 AC021231.2-201ENST00000594613 730 ntBASIC19.15■□□□□ 0.66
SEC22CQ9BRL7 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.15■□□□□ 0.66
SEC22CQ9BRL7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SEC22CQ9BRL7 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.15■□□□□ 0.66
SEC22CQ9BRL7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEC22CQ9BRL7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.15■□□□□ 0.66
SEC22CQ9BRL7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.15■□□□□ 0.66
SEC22CQ9BRL7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEC22CQ9BRL7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
SEC22CQ9BRL7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms